RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 RNF180Q86T96 592 aa12.18□□□□□ -0.46
MTHFD1-214ENST00000556771 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
MTHFD1-214ENST00000556771 CUL5Q93034 780 aa12.18□□□□□ -0.46
MTHFD1-214ENST00000556771 RMDN3Q96TC7 470 aa12.18□□□□□ -0.46
MTHFD1-214ENST00000556771 UPF2Q9HAU5 1272 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-214ENST00000556771 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
MTHFD1-214ENST00000556771 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
MTHFD1-214ENST00000556771 PIK3CDO00329 1044 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 ARHGEF16Q5VV41 709 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 CPLX2Q6PUV4 134 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 IL27Q8NEV9 243 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 TBC1D5Q92609 795 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 TAAR1Q96RJ0 339 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 Q9Y3F1 56 aa12.17□□□□□ -0.46
MTHFD1-214ENST00000556771 RBM47A0AV96 593 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 NKRFO15226 690 aaKnown RBP eCLIP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 COL6A1P12109 1028 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 IFNAR1P17181 557 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 CST5P28325 142 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 NKX3-2P78367 333 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 AKAP17AQ02040 695 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 TNFAIP2Q03169 654 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 LRRC41Q15345 812 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 STXBP2Q15833 593 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 FBXO16Q8IX29 292 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 PAWRQ96IZ0 340 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 PURBQ96QR8 312 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 C11orf49Q9H6J7 331 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 PSTPIP2Q9H939 334 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 GTF3C3Q9Y5Q9 886 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 PDE4DIPQ5VU43 2346 aa12.16□□□□□ -0.46
MTHFD1-214ENST00000556771 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 SYNRGQ9UMZ2 1314 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 CPLX1O14810 134 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 PRPF3O43395 683 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 STAM2O75886 525 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 CDKL5O76039 1030 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 NR3C2P08235 984 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 SCG2P13521 617 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 HOXA13P31271 388 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 GJA9P57773 515 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 NTRK3Q16288 839 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 PFKFB3Q16875 520 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 ANO1Q5XXA6 986 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 WWC2Q6AWC2 1192 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 XRRA1Q6P2D8 792 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 TRIM22Q8IYM9 498 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 FAM177A1Q8N128 213 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 PCSK9Q8NBP7 692 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 SMARCC2Q8TAQ2 1214 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 PDCD2LQ9BRP1 358 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 SLKQ9H2G2 1235 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 BARHL2Q9NY43 387 aa12.15□□□□□ -0.46
MTHFD1-214ENST00000556771 CENPFP49454 3210 aa12.15□□□□□ -0.47
MTHFD1-214ENST00000556771 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 ESYT2A0FGR8 921 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 MOXD2PA6NHM9 499 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 ADAMTS4O75173 837 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 PGK1P00558 417 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 EIF2AK2P19525 551 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 CCND2P30279 289 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 ADCYAP1R1P41586 468 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 NEK4P51957 841 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 NAPAP54920 295 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 CCT2P78371 535 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 TTLL4Q14679 1199 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 PGM5Q15124 567 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 DUSP28Q4G0W2 176 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 MCTP2Q6DN12 878 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 TLK2Q86UE8 772 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 FCHSD1Q86WN1 690 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 KLHDC9Q8NEP7 349 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 C22orf23Q9BZE7 217 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 WDR11Q9BZH6 1224 aa12.14□□□□□ -0.47
MTHFD1-214ENST00000556771 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms