RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 EXOC3L4Q17RC7 722 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 FAM133AQ8N9E0 248 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 LRRN4CLQ8ND94 238 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 SNCBQ16143 134 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 MMS22LQ6ZRQ5 1243 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 UHMK1Q8TAS1 419 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 HOMER2Q9NSB8 354 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 STK17AQ9UEE5 414 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 PARP2Q9UGN5 583 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 CLTCQ00610 1675 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 NCAPHQ15003 741 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 PPP2R5EQ16537 467 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 WHAMMQ8TF30 809 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 PSTPIP2Q9H939 334 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 BCRP11274 1271 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 HSPA2P54652 639 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 ZNF365Q70YC5 407 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 CNBD1Q8NA66 436 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 PIGBQ92521 554 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 RIPOR2Q9Y4F9 1068 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 PREX1Q8TCU6 1659 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 KRT5P13647 590 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 ATP2C1P98194 919 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 GRIN1Q05586 938 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 PKD2L1Q9P0L9 805 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 KIAA1024Q9UPX6 916 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 STK24Q9Y6E0 443 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 SERPING1P05155 500 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 VSIG1Q86XK7 387 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 ANKRD42Q8N9B4 389 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 BRIP1Q9BX63 1249 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 GGA1Q9UJY5 639 aa16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 BZW2Q9Y6E2 419 aaKnown RBP16.49■□□□□ 0.23
ARHGEF40-207ENST00000556399 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 PGRMC1O00264 195 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 DPYDQ12882 1025 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 PTPAQ15257 358 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 FUT8Q9BYC5 575 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 USP17L8P0C7I0 530 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 KIFAP3Q92845 792 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 PSD3Q9NYI0 1048 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 ITIH6Q6UXX5 1313 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 NR2F2P24468 414 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 USH1GQ495M9 461 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 NFRKBQ6P4R8 1299 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 A0A1W2PQC6 194 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 TARSL2A2RTX5 802 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 GYPCP04921 128 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 MXRA7P84157 204 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 MAEAQ7L5Y9 396 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 PPP1R14CQ8TAE6 165 aa16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF40-207ENST00000556399 ARHGEF35A5YM69 484 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 MUM1L1Q5H9M0 696 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 MCTP2Q6DN12 878 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 TRIM10Q9UDY6 481 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 CAPN11Q9UMQ6 739 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 HPSEQ9Y251 543 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 CDHR2Q9BYE9 1310 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 CCDC169A6NNP5 214 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 GLE1Q53GS7 698 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 ZNF622Q969S3 477 aaKnown RBP eCLIP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 MRRFQ96E11 262 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 DYNLL2Q96FJ2 89 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 OSBPL9Q96SU4 736 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 METTL14Q9HCE5 456 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 HOMER3Q9NSC5 361 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 NMT2O60551 498 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 SLC8A1P32418 973 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 CYP2J2P51589 502 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 PRR16Q569H4 304 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 FEZ2Q9UHY8 353 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 TMEM131LA2VDJ0 1609 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 PP2D1A8MPX8 630 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 N4BP1O75113 896 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 CLTAP09496 248 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 LRRC63Q05C16 580 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 NOA1Q8NC60 698 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 PIGSQ96S52 555 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 JPH2Q9BR39 696 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 FAM114A2Q9NRY5 505 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 ADAMTS1Q9UHI8 967 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 STK38LQ9Y2H1 464 aa16.47■□□□□ 0.23
ARHGEF40-207ENST00000556399 LRRC53A6NM62 1247 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 HMGB1P1B2RPK0 211 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 VIPAS39Q9H9C1 493 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 SH3GLB2Q9NR46 395 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 HDAC9Q9UKV0 1011 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 TECPR2O15040 1411 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 NPHP4O75161 1426 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms