RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 RFC2P35250 354 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 LRRFIP1Q32MZ4 808 aaKnown RBP18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 CASC1Q6TDU7 716 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 MORC4Q8TE76 937 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 APPBP2Q92624 585 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 COPS5Q92905 334 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 GMCL1Q96IK5 515 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 ZNF287Q9HBT7 754 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 SYNPO2Q9UMS6 1093 aa18.7■□□□□ 0.58
SDR39U1-217ENST00000556249 HIP1O00291 1037 aa18.69■□□□□ 0.58
SDR39U1-217ENST00000556249 CPT1AP50416 773 aa18.69■□□□□ 0.58
SDR39U1-217ENST00000556249 ALDH5A1P51649 535 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-217ENST00000556249 IFNL3Q8IZI9 196 aa18.69■□□□□ 0.58
SDR39U1-217ENST00000556249 UIMC1Q96RL1 719 aa18.69■□□□□ 0.58
SDR39U1-217ENST00000556249 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
SDR39U1-217ENST00000556249 PTPRSQ13332 1948 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 MUC6Q6W4X9 2439 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 PITPNM1O00562 1244 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 NFIBO00712 420 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 RNF113AO15541 343 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 NMT2O60551 498 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 DEFB103AP81534 67 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 RCSD1Q6JBY9 416 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 SEC62Q99442 399 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 ZBED2Q9BTP6 218 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 SUGCTQ9HAC7 445 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 STX8Q9UNK0 236 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 NOD1Q9Y239 953 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
SDR39U1-217ENST00000556249 IL9P15248 144 aa18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 SLC16A2P36021 539 aa18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 KCNJ6P48051 423 aa18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 GPNMBQ14956 572 aa18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 TTBK2Q6IQ55 1244 aa18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 GJD3Q8N144 294 aa18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 UBE2ZQ9H832 354 aaPredicted RBP18.67■□□□□ 0.58
SDR39U1-217ENST00000556249 RBM47A0AV96 593 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 PTPDC1A2A3K4 754 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 PATL2C9JE40 543 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 EIF5BO60841 1220 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 ICAM1P05362 532 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 KCNA5P22460 613 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 CHMLP26374 656 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 CALML3P27482 149 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 SSTR3P32745 418 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 PDE4BQ07343 736 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 BFSP2Q13515 415 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 TCTN1Q2MV58 587 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 C8orf34Q49A92 452 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 NFRKBQ6P4R8 1299 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 SLC30A10Q6XR72 485 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 FAM178BQ8IXR5 827 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 IL17RBQ9NRM6 502 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 ADD3Q9UEY8 706 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 BRWD1Q9NSI6 2320 aa18.66■□□□□ 0.58
SDR39U1-217ENST00000556249 TANC1Q9C0D5 1861 aa18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 TRIP12Q14669 1992 aaPredicted RBP18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 PRR33A8MZF0 331 aa18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 PLA2G6O60733 806 aa18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 BAIAP3O94812 1187 aa18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 PTGISQ16647 500 aa18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 CCDC96Q2M329 555 aa18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 FAM117BQ6P1L5 589 aa18.65■□□□□ 0.58
SDR39U1-217ENST00000556249 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.64■□□□□ 0.57
SDR39U1-217ENST00000556249 GNAT2P19087 354 aa18.64■□□□□ 0.57
SDR39U1-217ENST00000556249 MRE11P49959 708 aa18.64■□□□□ 0.57
SDR39U1-217ENST00000556249 PPARAQ07869 468 aa18.64■□□□□ 0.57
SDR39U1-217ENST00000556249 PPP2R5BQ15173 497 aa18.64■□□□□ 0.57
SDR39U1-217ENST00000556249 RUFY2Q8WXA3 655 aa18.64■□□□□ 0.57
SDR39U1-217ENST00000556249 CTAGE1Q96RT6 745 aa18.64■□□□□ 0.57
SDR39U1-217ENST00000556249 A6NJR5 290 aa18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 TSPY2A6NKD2 308 aa18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 ARIH2O95376 493 aa18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 CTDSPL2Q05D32 466 aa18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 PDE4DQ08499 809 aa18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 BRDTQ58F21 947 aaPredicted RBP18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 GDF6Q6KF10 455 aaPredicted RBP18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 NAPBQ9H115 298 aa18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 RANBP17Q9H2T7 1088 aaKnown RBP18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 LMCD1Q9NZU5 365 aa18.63■□□□□ 0.57
SDR39U1-217ENST00000556249 NBNO60934 754 aa18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 SLC3A2P08195 630 aaKnown RBP18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 TXNP10599 105 aaKnown RBP18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 ERVK-21P61565 698 aa18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 LEXMQ3ZCV2 418 aa18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 PTCRAQ6ISU1 281 aaPredicted RBP18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 CLEC4DQ8WXI8 215 aa18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 DHX38Q92620 1227 aaKnown RBP18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 BACH2Q9BYV9 841 aa18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 FRMPD2Q68DX3 1309 aaPredicted RBP18.62■□□□□ 0.57
SDR39U1-217ENST00000556249 RAD50Q92878 1312 aa18.61■□□□□ 0.57
SDR39U1-217ENST00000556249 LINC01553A4QN01 128 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms