RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 DIS3L2Q8IYB7 885 aaKnown RBP13.14□□□□□ -0.31
GABRB3-210ENST00000556166 REXO1Q8N1G1 1221 aaKnown RBP13.14□□□□□ -0.31
GABRB3-210ENST00000556166 TRIB2Q92519 343 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 ZFP91Q96JP5 570 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-210ENST00000556166 APBA2Q99767 749 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 PXMP2Q9NR77 195 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 PTPN22Q9Y2R2 807 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 PTCH2Q9Y6C5 1203 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 HTTP42858 3142 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
GABRB3-210ENST00000556166 EDNRBP24530 442 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 TRIM32Q13049 653 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
GABRB3-210ENST00000556166 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
GABRB3-210ENST00000556166 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 BICD2Q8TD16 824 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 NSUN6Q8TEA1 469 aaKnown RBP13.13□□□□□ -0.31
GABRB3-210ENST00000556166 CRYGNQ8WXF5 182 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 PDCD2LQ9BRP1 358 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 MYH6P13533 1939 aa13.13□□□□□ -0.31
GABRB3-210ENST00000556166 ADCY3O60266 1144 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 FOSP01100 380 aaPredicted RBP13.12□□□□□ -0.31
GABRB3-210ENST00000556166 NR3C2P08235 984 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 CYP2C19P33261 490 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 DDIT3P35638 169 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 KRT2P35908 639 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 PRMT2P55345 433 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 MRPS9P82933 396 aaKnown RBP13.12□□□□□ -0.31
GABRB3-210ENST00000556166 PKP1Q13835 747 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 PGM5Q15124 567 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 PRAMEF19Q5SWL8 479 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 ARHGEF16Q5VV41 709 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 OLFML2BQ68BL8 750 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 RAET1EQ8TD07 263 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 ANO3Q9BYT9 981 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 MTMR6Q9Y217 621 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 KIF3AQ9Y496 699 aa13.12□□□□□ -0.31
GABRB3-210ENST00000556166 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABRB3-210ENST00000556166 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 TRPV1Q8NER1 839 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 ADD3Q9UEY8 706 aaKnown RBP13.11□□□□□ -0.31
GABRB3-210ENST00000556166 MGAMO43451 1857 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 SPDYE3A6NKU9 549 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 H3BQV1 296 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 WNT7AO00755 349 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 STX6O43752 255 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 RGS20O76081 388 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 PDCP20941 246 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 SREBF1P36956 1147 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 PIK3AP1Q6ZUJ8 805 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 CYP2W1Q8TAV3 490 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 PXYLP1Q8TE99 480 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-210ENST00000556166 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-210ENST00000556166 ZDHHC9Q9Y397 364 aa13.11□□□□□ -0.31
GABRB3-210ENST00000556166 LCTP09848 1927 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 ZNF236Q9UL36 1845 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 ZNFX1Q9P2E3 1918 aaKnown RBP13.1□□□□□ -0.31
GABRB3-210ENST00000556166 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-210ENST00000556166 ASB14A6NK59 587 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-210ENST00000556166 ARHGAP4P98171 946 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 CACNB2Q08289 660 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-210ENST00000556166 SAFBQ15424 915 aaKnown RBP eCLIP13.1□□□□□ -0.31
GABRB3-210ENST00000556166 INF2Q27J81 1249 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 PCNX4Q63HM2 1172 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 EEPD1Q7L9B9 569 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 MSL3Q8N5Y2 521 aaKnown RBP13.1□□□□□ -0.31
GABRB3-210ENST00000556166 TBCKQ8TEA7 893 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 PDGFCQ9NRA1 345 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 RTEL1Q9NZ71 1219 aa13.1□□□□□ -0.31
GABRB3-210ENST00000556166 SYNGAP1Q96PV0 1343 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 CYP3A4P08684 503 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-210ENST00000556166 ITGB5P18084 799 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 GRK4P32298 578 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-210ENST00000556166 PDE4DQ08499 809 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
GABRB3-210ENST00000556166 TMEM63BQ5T3F8 832 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 MCTP2Q6DN12 878 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 TAPT1Q6NXT6 567 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms