RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ENAHQ8N8S7 591 aaPredicted RBP22.02■■□□□ 1.12
CDKN3-209ENST00000556102 ZSWIM5Q9P217 1185 aa22.02■■□□□ 1.12
CDKN3-209ENST00000556102 CTNNA3Q9UI47 895 aa22.02■■□□□ 1.12
CDKN3-209ENST00000556102 ABCB11O95342 1321 aa22.02■■□□□ 1.12
CDKN3-209ENST00000556102 OTOP2Q7RTS6 562 aa22.01■■□□□ 1.11
CDKN3-209ENST00000556102 ADGRF4Q8IZF3 695 aa22.01■■□□□ 1.11
CDKN3-209ENST00000556102 TRMT13Q9NUP7 481 aaKnown RBP22.01■■□□□ 1.11
CDKN3-209ENST00000556102 MSRAQ9UJ68 235 aa22.01■■□□□ 1.11
CDKN3-209ENST00000556102 TNKSO95271 1327 aa22.01■■□□□ 1.11
CDKN3-209ENST00000556102 KIAA1217Q5T5P2 1943 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 A6NJR5 290 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 KPNA6O60684 536 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 TXNP10599 105 aaKnown RBP22■■□□□ 1.11
CDKN3-209ENST00000556102 TTLL4Q14679 1199 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 COPS5Q92905 334 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 SCLYQ96I15 445 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 KRT23Q9C075 422 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 CNNM2Q9H8M5 875 aa22■■□□□ 1.11
CDKN3-209ENST00000556102 VCANP13611 3396 aa21.99■■□□□ 1.11
CDKN3-209ENST00000556102 CYP2C9P11712 490 aa21.99■■□□□ 1.11
CDKN3-209ENST00000556102 NBPF20Q3BBV1 942 aa21.99■■□□□ 1.11
CDKN3-209ENST00000556102 SYTL5Q8TDW5 730 aaPredicted RBP21.99■■□□□ 1.11
CDKN3-209ENST00000556102 GAS2L1Q99501 681 aaPredicted RBP21.99■■□□□ 1.11
CDKN3-209ENST00000556102 CHD9Q3L8U1 2897 aa21.99■■□□□ 1.11
CDKN3-209ENST00000556102 SCN5AQ14524 2016 aa21.99■■□□□ 1.11
CDKN3-209ENST00000556102 PFKMP08237 780 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 PARP1P09874 1014 aaKnown RBP21.98■■□□□ 1.11
CDKN3-209ENST00000556102 QRICH1Q2TAL8 776 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 FAM47CQ5HY64 1035 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 NFRKBQ6P4R8 1299 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 MCF2L2Q86YR7 1114 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 USP38Q8NB14 1042 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 TBC1D5Q92609 795 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 VWCEQ96DN2 955 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 UBAC1Q9BSL1 405 aa21.98■■□□□ 1.11
CDKN3-209ENST00000556102 DHX16O60231 1041 aaKnown RBP21.97■■□□□ 1.11
CDKN3-209ENST00000556102 ARIH2O95376 493 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 PTPN11Q06124 597 aaPredicted RBP21.97■■□□□ 1.11
CDKN3-209ENST00000556102 CCDC62Q6P9F0 684 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 FBXO11Q86XK2 927 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 NSUN6Q8TEA1 469 aaKnown RBP21.97■■□□□ 1.11
CDKN3-209ENST00000556102 TAAR1Q96RJ0 339 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 NKX2-4Q9H2Z4 354 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 PRDM12Q9H4Q4 367 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 JMJD4Q9H9V9 463 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 COL20A1Q9P218 1284 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 MRPL11Q9Y3B7 192 aaKnown RBP21.97■■□□□ 1.11
CDKN3-209ENST00000556102 SLC4A7Q9Y6M7 1214 aa21.97■■□□□ 1.11
CDKN3-209ENST00000556102 TANC1Q9C0D5 1861 aa21.96■■□□□ 1.11
CDKN3-209ENST00000556102 IFIT1BQ5T764 474 aaKnown RBP21.96■■□□□ 1.11
CDKN3-209ENST00000556102 IWS1Q96ST2 819 aa21.96■■□□□ 1.11
CDKN3-209ENST00000556102 YBX2Q9Y2T7 364 aaKnown RBP21.96■■□□□ 1.11
CDKN3-209ENST00000556102 ZBBXA8MT70 800 aa21.95■■□□□ 1.1
CDKN3-209ENST00000556102 SEPT14Q6ZU15 432 aa21.95■■□□□ 1.1
CDKN3-209ENST00000556102 RMDN3Q96TC7 470 aa21.95■■□□□ 1.1
CDKN3-209ENST00000556102 IL25Q9H293 177 aa21.95■■□□□ 1.1
CDKN3-209ENST00000556102 SLC28A3Q9HAS3 691 aa21.95■■□□□ 1.1
CDKN3-209ENST00000556102 VAT1LQ9HCJ6 419 aa21.95■■□□□ 1.1
CDKN3-209ENST00000556102 TTC28Q96AY4 2481 aa21.94■■□□□ 1.1
CDKN3-209ENST00000556102 PITPNM1O00562 1244 aa21.94■■□□□ 1.1
CDKN3-209ENST00000556102 GH1P01241 217 aa21.94■■□□□ 1.1
CDKN3-209ENST00000556102 RFC2P35250 354 aa21.94■■□□□ 1.1
CDKN3-209ENST00000556102 SEC23AQ15436 765 aa21.94■■□□□ 1.1
CDKN3-209ENST00000556102 STXBP2Q15833 593 aa21.94■■□□□ 1.1
CDKN3-209ENST00000556102 PPP1R13LQ8WUF5 828 aa21.94■■□□□ 1.1
CDKN3-209ENST00000556102 TRIP12Q14669 1992 aaPredicted RBP21.94■■□□□ 1.1
CDKN3-209ENST00000556102 MMP3P08254 477 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 ARHGAP1Q07960 439 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 LY6KQ17RY6 165 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 DEFB128Q7Z7B8 93 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 STAG2Q8N3U4 1231 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 AFG1LQ8WV93 481 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 AMNQ9BXJ7 453 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 CHD7Q9P2D1 2997 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 PCDHA11Q9Y5I1 949 aa21.93■■□□□ 1.1
CDKN3-209ENST00000556102 GSPT1P15170 499 aaKnown RBP21.92■■□□□ 1.1
CDKN3-209ENST00000556102 ATP2A2P16615 1042 aaKnown RBP21.92■■□□□ 1.1
CDKN3-209ENST00000556102 PDE4AP27815 886 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 RABGGTBP53611 331 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 ADGRE1Q14246 886 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 TTC22Q5TAA0 569 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 ARHGEF16Q5VV41 709 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 RETREG2Q8NC44 543 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 SYMPKQ92797 1274 aaKnown RBP21.92■■□□□ 1.1
CDKN3-209ENST00000556102 NOD1Q9Y239 953 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 TET1Q8NFU7 2136 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 MYH7BA7E2Y1 1941 aa21.92■■□□□ 1.1
CDKN3-209ENST00000556102 KLRF2D3W0D1 207 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 CFBP00751 764 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 IQCF3P0C7M6 154 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 ACTN1P12814 892 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 EIF2AK2P19525 551 aaKnown RBP21.91■■□□□ 1.1
CDKN3-209ENST00000556102 GHRHRQ02643 423 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 BFSP2Q13515 415 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 CYB5R4Q7L1T6 521 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 MTMR8Q96EF0 704 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 PXMP2Q9NR77 195 aa21.91■■□□□ 1.1
CDKN3-209ENST00000556102 SPTBN5Q9NRC6 3674 aaKnown RBP21.91■■□□□ 1.1
CDKN3-209ENST00000556102 OPLAHO14841 1288 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 EIF3JO75822 258 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms