RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 C12orf49Q9H741 205 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 USP40Q9NVE5 1235 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 SMPD4Q9NXE4 827 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 DCTN4Q9UJW0 460 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 PCDHB5Q9Y5E4 795 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 PLEKHG1Q9ULL1 1385 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 A0A0C4DFX4 3053 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 TUBGCP6Q96RT7 1819 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 EHBP1L1Q8N3D4 1523 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 RGPD8O14715 1765 aaPredicted RBP4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 PARD3Q8TEW0 1356 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 TMEM82A0PJX8 343 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 ITGB3P05106 788 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 USP17L7P0C7H9 530 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 LMNB1P20700 586 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 TGM1P22735 817 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 ARL4AP40617 200 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 RTP1P59025 263 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 RPL6Q02878 288 aaKnown RBP4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 NBPF8Q3BBV2 869 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 VWA3BQ502W6 1294 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 TMEM201Q5SNT2 666 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 NT5DC1Q5TFE4 455 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 ALG1LQ6GMV1 187 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 GALNT18Q6P9A2 607 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 LIPIQ6XZB0 460 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 AGMOQ6ZNB7 445 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 FERMT3Q86UX7 667 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 LSRQ86X29 649 aaPredicted RBP4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 DAGLBQ8NCG7 672 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 LINC00116Q8NCU8 138 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 FAM13CQ8NE31 585 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 HDAC8Q9BY41 377 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 LMTK2Q8IWU2 1503 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 PDE4DIPQ5VU43 2346 aa4.71□□□□□ -1.66
EFCAB11-210ENST00000556078 UPK3BL1B0FP48 263 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 UPK3BL2E5RIL1 263 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 NMIQ13287 307 aaPredicted RBP4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 RAB3GAP1Q15042 981 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 TSNAXIP1Q2TAA8 658 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 PTF1AQ7RTS3 328 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 TTC9BQ8N6N2 239 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 RBM15Q96T37 977 aaKnown RBP eCLIP4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 ASCC2Q9H1I8 757 aaPredicted RBP4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 TNFRSF10DQ9UBN6 386 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 SPG7Q9UQ90 795 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 EIF2AK4Q9P2K8 1649 aaKnown RBP4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 ARHGEF5Q12774 1597 aa4.7□□□□□ -1.66
EFCAB11-210ENST00000556078 PEAK1Q9H792 1746 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 MAP3K5Q99683 1374 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 WTIPA6NIX2 430 aaPredicted RBP4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 FADS2P1A8MWK0 482 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 PFKLP17858 780 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 NCKAP1LP55160 1127 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 PCBP3P57721 371 aaKnown RBP4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 ZNF655Q8N720 491 aaPredicted RBP4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 FOXP3Q9BZS1 431 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 MIR1-1HGQ9H1L0 117 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 TNFRSF12AQ9NP84 129 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 TCFL5Q9UL49 500 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 TTF2Q9UNY4 1162 aaKnown RBP4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 CDK11AQ9UQ88 783 aaPredicted RBP4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 TBX22Q9Y458 520 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 SZT2Q5T011 3432 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 COL6A3P12111 3177 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 PLEKHH2Q8IVE3 1493 aa4.69□□□□□ -1.66
EFCAB11-210ENST00000556078 NEXMIFQ5QGS0 1516 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 SH3D21A4FU49 640 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 ZNF20P17024 532 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 PLCG1P19174 1290 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 TNNI2P48788 182 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 HSF5Q4G112 596 aaPredicted RBP4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 SAPCD2Q86UD0 394 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 TCTN2Q96GX1 697 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 SAMD11Q96NU1 681 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 TAF6LQ9Y6J9 622 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 ARHGAP31Q2M1Z3 1444 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 RIMS2Q9UQ26 1411 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 ADGRL2O95490 1459 aa4.68□□□□□ -1.66
EFCAB11-210ENST00000556078 TOPAZ1Q8N9V7 1692 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 CRYBG1Q9Y4K1 1723 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 CYR61O00622 381 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 NOBOXO60393 691 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 MSL3P1P0C860 447 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 LIMS1P48059 325 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 MAPKAPK2P49137 400 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 RGS19P49795 217 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 FMR1Q06787 632 aaKnown RBP eCLIP4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 TARBP2Q15633 366 aaKnown RBP4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 BBS9Q3SYG4 887 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 RPTNQ6XPR3 784 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 FNIP1Q8TF40 1166 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 FCRL2Q96LA5 508 aaPredicted RBP4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 CCDC74BQ96LY2 380 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 SPATA25Q9BR10 227 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 SUSD2Q9UGT4 822 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 ACSL6Q9UKU0 697 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 CORINQ9Y5Q5 1042 aa4.67□□□□□ -1.66
EFCAB11-210ENST00000556078 DUSP10Q9Y6W6 482 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms