RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 KIF28PB7ZC32 967 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 PDLIM1O00151 329 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 FOXD2O60548 495 aaPredicted RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 GNAT1P11488 350 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 NUBP1P53384 320 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 CUL3Q13618 768 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 MEX3CQ5U5Q3 659 aaKnown RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 NAA35Q5VZE5 725 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 KCTD16Q68DU8 428 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 NUTM2AQ8IVF1 878 aaPredicted RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 USHBP1Q8N6Y0 703 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 OXCT2Q9BYC2 517 aaPredicted RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 QPCTLQ9NXS2 382 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 TRIM10Q9UDY6 481 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 GUCA1BQ9UMX6 200 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 TARSL2A2RTX5 802 aaKnown RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 PI4KAP2A4QPH2 592 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 DESP17661 470 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 CSE1LP55060 971 aaKnown RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 DDB1Q16531 1140 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 CCDC102BQ68D86 513 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 CYB5D1Q6P9G0 228 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 CCBE1Q6UXH8 406 aaPredicted RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 YTHDF3Q7Z739 585 aaKnown RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 SAMD14Q8IZD0 417 aaPredicted RBP11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 SH2D3CQ8N5H7 860 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 PI4KAP1Q8N8J0 262 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 SLF1Q9BQI6 1058 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 HPSEQ9Y251 543 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 RREB1Q92766 1687 aa11.39□□□□□ -0.59
EFCAB11-208ENST00000555872 MFAP3LO75121 409 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 FERP16591 822 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 LRP8Q14114 963 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 TRAPPC11Q7Z392 1133 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 PALB2Q86YC2 1186 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 UBE2OQ9C0C9 1292 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 MYO1AQ9UBC5 1043 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 PLCH1Q4KWH8 1693 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 A0A1B0GTH6 734 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 HIP1RO75146 1068 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 MTRF1O75570 445 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 ENDOUP21128 410 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 FXR1P51114 621 aaKnown RBP eCLIP11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 SKOR1P84550 965 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 GUCY1A3Q02108 690 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 BEND3Q5T5X7 828 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 LMBRD2Q68DH5 695 aaPredicted RBP11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 SAR1BQ9Y6B6 198 aa11.38□□□□□ -0.59
EFCAB11-208ENST00000555872 SEMA3EO15041 775 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 ATP1A1P05023 1023 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 LSP1P33241 339 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SEC24CP53992 1094 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 CBX3Q13185 183 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 NBPF14Q5TI25 921 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 THOC7Q6I9Y2 204 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 BRAPQ7Z569 592 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 CAGE1Q8TC20 777 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 UIMC1Q96RL1 719 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 MED15Q96RN5 788 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 MAN1B1Q9UKM7 699 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SLC45A1Q9Y2W3 748 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SART1O43290 800 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 TUFMP49411 452 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 ERVK-24P63145 666 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 PLCB4Q15147 1175 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 MAP7D1Q3KQU3 841 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SLC9C2Q5TAH2 1124 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 EPN3Q9H201 632 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SYNCQ9H7C4 482 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 ZNF304Q9HCX3 659 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 ATRNO75882 1429 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 ERICH2A1L162 156 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 P4HA2O15460 535 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SMNDC1O75940 238 aaKnown RBP eCLIP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 GNAT2P19087 354 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 NEK2P51955 445 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SH3BGRP55822 239 aaPredicted RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 SPECC1Q5M775 1068 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 NCCRP1Q6ZVX7 275 aaPredicted RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 IL17REQ8NFR9 667 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 AENQ8WTP8 325 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
EFCAB11-208ENST00000555872 ERP27Q96DN0 273 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms