RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 TMTC3Q6ZXV5 915 aa18.12■□□□□ 0.49
SDR39U1-215ENST00000555830 SRBD1Q8N5C6 995 aaKnown RBP18.12■□□□□ 0.49
SDR39U1-215ENST00000555830 MORC4Q8TE76 937 aa18.12■□□□□ 0.49
SDR39U1-215ENST00000555830 GLT1D1Q96MS3 346 aa18.12■□□□□ 0.49
SDR39U1-215ENST00000555830 TSEN34Q9BSV6 310 aaKnown RBP18.12■□□□□ 0.49
SDR39U1-215ENST00000555830 WDR11Q9BZH6 1224 aa18.12■□□□□ 0.49
SDR39U1-215ENST00000555830 hCG_1642624A0A1W2PR95 340 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 MYCLP12524 364 aaPredicted RBP18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 RPS6KB1P23443 525 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 METAP2P50579 478 aaKnown RBP eCLIP18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 GJA9P57773 515 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 STXBP2Q15833 593 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 TRIM60Q495X7 471 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 TAPT1Q6NXT6 567 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 SEPT14Q6ZU15 432 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 HEATR3Q7Z4Q2 680 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 OR6J1Q8NGC5 347 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 SCFD2Q8WU76 684 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 BRF1Q92994 677 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 UPF3AQ9H1J1 476 aaKnown RBP18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 COL20A1Q9P218 1284 aa18.11■□□□□ 0.49
SDR39U1-215ENST00000555830 EPB41L2O43491 1005 aaKnown RBP18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 EIF5BO60841 1220 aaKnown RBP18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 ASGR1P07306 291 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 CST5P28325 142 aaPredicted RBP18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 HSD17B4P51659 736 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 FSCN1Q16658 493 aaKnown RBP18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 SAMD3Q8N6K7 520 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 KCNB2Q92953 911 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 IWS1Q96ST2 819 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 PXMP2Q9NR77 195 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 MAP3K20Q9NYL2 800 aaKnown RBP18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
SDR39U1-215ENST00000555830 PQBP1O60828 265 aaKnown RBP18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 TXNP10599 105 aaKnown RBP18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 EDNRBP24530 442 aa18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 IRX5P78411 483 aaPredicted RBP18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 DUSP28Q4G0W2 176 aa18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 KLHDC9Q8NEP7 349 aa18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 LBHD1Q9BQE6 289 aaPredicted RBP18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 COLQQ9Y215 455 aaPredicted RBP18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 GNEQ9Y223 722 aaKnown RBP18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 CYP46A1Q9Y6A2 500 aa18.09■□□□□ 0.49
SDR39U1-215ENST00000555830 CCDC196A0A1B0GTZ2 297 aa18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 OPLAHO14841 1288 aa18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 NKRFO15226 690 aaKnown RBP eCLIP18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 NR3C2P08235 984 aa18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 PTGS1P23219 599 aa18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 CCND2P30279 289 aa18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 CPT1AP50416 773 aa18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 USP26Q9BXU7 913 aa18.08■□□□□ 0.48
SDR39U1-215ENST00000555830 CNTNAP5Q8WYK1 1306 aa18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 MYL3P08590 195 aa18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 CXCL17Q6UXB2 119 aa18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 RUFY3Q7L099 469 aa18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 GPKOWQ92917 476 aaPredicted RBP eCLIP18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 Q9Y3F1 56 aa18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 MRVI1Q9Y6F6 885 aa18.07■□□□□ 0.48
SDR39U1-215ENST00000555830 MROH7Q68CQ1 1323 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 DCDC2CA8MYV0 355 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 RCAN1P53805 252 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 NAPAP54920 295 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 AKAP17AQ02040 695 aaKnown RBP18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 TLE2Q04725 743 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 TMEM63BQ5T3F8 832 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 PDCD2LQ9BRP1 358 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 UPF3BQ9BZI7 483 aaKnown RBP18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 PSTPIP2Q9H939 334 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 MYH7BA7E2Y1 1941 aa18.06■□□□□ 0.48
SDR39U1-215ENST00000555830 ELP1O95163 1332 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 RBM47A0AV96 593 aaKnown RBP18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 TLR3O15455 904 aaKnown RBP18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 EIF3JO75822 258 aaKnown RBP18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 CABYRO75952 493 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 CLTBP09497 229 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 MAGEA10P43363 369 aaPredicted RBP18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 CHMP4BP1P59074 171 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 MDM2Q00987 491 aaPredicted RBP18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 GHRHRQ02643 423 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 SNX17Q15036 470 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 PGM5Q15124 567 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 USP17L6PQ6QN14 398 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 COPS5Q92905 334 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 EHMT1Q9H9B1 1298 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 POLR3EQ9NVU0 708 aa18.05■□□□□ 0.48
SDR39U1-215ENST00000555830 SPDYE3A6NKU9 549 aa18.04■□□□□ 0.48
SDR39U1-215ENST00000555830 GH1P01241 217 aa18.04■□□□□ 0.48
SDR39U1-215ENST00000555830 LY6KQ17RY6 165 aa18.04■□□□□ 0.48
SDR39U1-215ENST00000555830 HABP4Q5JVS0 413 aaKnown RBP18.04■□□□□ 0.48
SDR39U1-215ENST00000555830 CCSAPQ6IQ19 270 aaPredicted RBP18.04■□□□□ 0.48
SDR39U1-215ENST00000555830 UBE2OQ9C0C9 1292 aaKnown RBP18.04■□□□□ 0.48
SDR39U1-215ENST00000555830 V9GY48 417 aaPredicted RBP18.04■□□□□ 0.48
SDR39U1-215ENST00000555830 ARIH2O95376 493 aa18.03■□□□□ 0.48
SDR39U1-215ENST00000555830 CDC27P30260 824 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms