RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 A6NJR5 290 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 GPR37L1O60883 481 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 WDR5P61964 334 aaKnown RBP22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 DEFB103AP81534 67 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 BFSP2Q13515 415 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 PPP2R5BQ15173 497 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 TCTN1Q2MV58 587 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 GPCPD1Q9NPB8 672 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 MTUS1Q9ULD2 1270 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 NOD1Q9Y239 953 aa22.42■■□□□ 1.18
SUPT16H-203ENST00000555752 RANBP6O60518 1105 aaKnown RBP22.41■■□□□ 1.18
SUPT16H-203ENST00000555752 BAIAP3O94812 1187 aa22.41■■□□□ 1.18
SUPT16H-203ENST00000555752 ARIH2O95376 493 aa22.41■■□□□ 1.18
SUPT16H-203ENST00000555752 PDE4DQ08499 809 aa22.41■■□□□ 1.18
SUPT16H-203ENST00000555752 SYDE2Q5VT97 1194 aa22.41■■□□□ 1.18
SUPT16H-203ENST00000555752 DCAF4Q8WV16 495 aa22.41■■□□□ 1.18
SUPT16H-203ENST00000555752 TXNP10599 105 aaKnown RBP22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 KCNJ6P48051 423 aa22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 NOVP48745 357 aa22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 PTGISQ16647 500 aa22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 BRDTQ58F21 947 aaPredicted RBP22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 PPP4R3BQ5MIZ7 849 aa22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 ZMYM1Q5SVZ6 1142 aa22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 BTNL9Q6UXG8 535 aa22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 RNF207Q6ZRF8 634 aa22.4■■□□□ 1.18
SUPT16H-203ENST00000555752 RAD50Q92878 1312 aa22.39■■□□□ 1.18
SUPT16H-203ENST00000555752 PI4K2BG5E9Z4 385 aa22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 EDNRBP24530 442 aa22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 RPS6P62753 249 aaKnown RBP22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 PTPN11Q06124 597 aaPredicted RBP22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 GDF6Q6KF10 455 aaPredicted RBP22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 OTUD7AQ8TE49 926 aaPredicted RBP22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 SCFD2Q8WU76 684 aa22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 DHX38Q92620 1227 aaKnown RBP22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 ZBED2Q9BTP6 218 aa22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 FSD1Q9BTV5 496 aa22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 CHMP4BQ9H444 224 aaKnown RBP22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 SUGCTQ9HAC7 445 aa22.39■■□□□ 1.17
SUPT16H-203ENST00000555752 LOC102724159A0A0B4J2E5 919 aa22.38■■□□□ 1.17
SUPT16H-203ENST00000555752 NKRFO15226 690 aaKnown RBP eCLIP22.38■■□□□ 1.17
SUPT16H-203ENST00000555752 KPNA6O60684 536 aa22.38■■□□□ 1.17
SUPT16H-203ENST00000555752 PWP2Q15269 919 aaKnown RBP22.38■■□□□ 1.17
SUPT16H-203ENST00000555752 VPS53Q5VIR6 699 aa22.38■■□□□ 1.17
SUPT16H-203ENST00000555752 PI4K2BQ8TCG2 481 aa22.38■■□□□ 1.17
SUPT16H-203ENST00000555752 DCTPP1Q9H773 170 aa22.38■■□□□ 1.17
SUPT16H-203ENST00000555752 LRRFIP1Q32MZ4 808 aaKnown RBP22.37■■□□□ 1.17
SUPT16H-203ENST00000555752 AFG1LQ8WV93 481 aa22.37■■□□□ 1.17
SUPT16H-203ENST00000555752 TMEM47Q9BQJ4 181 aa22.37■■□□□ 1.17
SUPT16H-203ENST00000555752 NBNO60934 754 aa22.36■■□□□ 1.17
SUPT16H-203ENST00000555752 FAM117BQ6P1L5 589 aa22.36■■□□□ 1.17
SUPT16H-203ENST00000555752 LRRC8DQ7L1W4 858 aa22.36■■□□□ 1.17
SUPT16H-203ENST00000555752 AFAP1L1Q8TED9 768 aa22.36■■□□□ 1.17
SUPT16H-203ENST00000555752 UBE2ZQ9H832 354 aaPredicted RBP22.36■■□□□ 1.17
SUPT16H-203ENST00000555752 LMCD1Q9NZU5 365 aa22.36■■□□□ 1.17
SUPT16H-203ENST00000555752 MUC6Q6W4X9 2439 aa22.36■■□□□ 1.17
SUPT16H-203ENST00000555752 SELPP16109 830 aa22.35■■□□□ 1.17
SUPT16H-203ENST00000555752 ALYREFQ86V81 257 aaKnown RBP22.35■■□□□ 1.17
SUPT16H-203ENST00000555752 CAGE1Q8TC20 777 aa22.35■■□□□ 1.17
SUPT16H-203ENST00000555752 KAT2BQ92831 832 aa22.35■■□□□ 1.17
SUPT16H-203ENST00000555752 SIP14410 1827 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 LINC01553A4QN01 128 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 ORC4O43929 436 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 GJB5O95377 273 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 MMP3P08254 477 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 PDHBP11177 359 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 IL9P15248 144 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 KCNA5P22460 613 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 ERVK-21P61565 698 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 LY6KQ17RY6 165 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 RRP12Q5JTH9 1297 aaKnown RBP22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 CCDC62Q6P9F0 684 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 CNKSR3Q6P9H4 555 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 FAM178BQ8IXR5 827 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 MIER1Q8N108 512 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 CCDC155Q8N6L0 562 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 DNERQ8NFT8 737 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 TOMM22Q9NS69 142 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 ANAPC4Q9UJX5 808 aa22.34■■□□□ 1.17
SUPT16H-203ENST00000555752 CXCL10P02778 98 aa22.33■■□□□ 1.17
SUPT16H-203ENST00000555752 TOP1P11387 765 aaKnown RBP22.33■■□□□ 1.17
SUPT16H-203ENST00000555752 CKBP12277 381 aa22.33■■□□□ 1.17
SUPT16H-203ENST00000555752 CHST3Q7LGC8 479 aa22.33■■□□□ 1.17
SUPT16H-203ENST00000555752 GJD3Q8N144 294 aa22.33■■□□□ 1.17
SUPT16H-203ENST00000555752 TGS1Q96RS0 853 aaKnown RBP22.33■■□□□ 1.17
SUPT16H-203ENST00000555752 RAD9AQ99638 391 aa22.33■■□□□ 1.17
SUPT16H-203ENST00000555752 TTC41PQ6P2S7 1318 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 ARHGAP1Q07960 439 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 LEXMQ3ZCV2 418 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 USH1GQ495M9 461 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 SEPT14Q6ZU15 432 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 SESTD1Q86VW0 696 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 TBC1D5Q92609 795 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 WNT8BQ93098 351 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 MPHOSPH6Q99547 160 aaKnown RBP22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 CPVLQ9H3G5 476 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 HDAC6Q9UBN7 1215 aa22.32■■□□□ 1.16
SUPT16H-203ENST00000555752 FGRP09769 529 aa22.31■■□□□ 1.16
SUPT16H-203ENST00000555752 ZNF543Q08ER8 600 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms