RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-222	ENST00000555617	MAGEB6	Q8N7X4	407 aa		14.01	□□□□□ -0.17
ABCD4-222	ENST00000555617	TGFBRAP1	Q8WUH2	860 aa		14.01	□□□□□ -0.17
ABCD4-222	ENST00000555617	YME1L1	Q96TA2	773 aa		14.01	□□□□□ -0.17
ABCD4-222	ENST00000555617	RTP3	Q9BQQ7	232 aa		14.01	□□□□□ -0.17
ABCD4-222	ENST00000555617	KIN	O60870	393 aa	Known RBP	14	□□□□□ -0.17
ABCD4-222	ENST00000555617	ADORA1	P30542	326 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	STAT3	P40763	770 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	IKBKE	Q14164	716 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	SEPT2	Q15019	361 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	SPICE1	Q8N0Z3	855 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	AFAP1L1	Q8TED9	768 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	AP5M1	Q9H0R1	490 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	PNN	Q9H307	717 aa	Known RBP	14	□□□□□ -0.17
ABCD4-222	ENST00000555617	CACNA2D2	Q9NY47	1150 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	PIEZO2	Q9H5I5	2752 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	SPTA1	P02549	2419 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	LCT	P09848	1927 aa		14	□□□□□ -0.17
ABCD4-222	ENST00000555617	GDF9	O60383	454 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	UPP2	O95045	317 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	SELP	P16109	830 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	SPINK2	P20155	84 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	ANKRD44	Q8N8A2	993 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	NETO1	Q8TDF5	533 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	NSUN4	Q96CB9	384 aa	Known RBP	13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	TRIM34	Q9BYJ4	488 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	PATJ	Q8NI35	1801 aa		13.99	□□□□□ -0.17
ABCD4-222	ENST00000555617	TEX15	Q9BXT5	2789 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	SEMA3E	O15041	775 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	ZEB2	O60315	1214 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	HOXD8	P13378	290 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	BMPR1A	P36894	532 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	MCAM	P43121	646 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	TRIM26	Q12899	539 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	FKBP5	Q13451	457 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	CLEC10A	Q8IUN9	316 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	SIX5	Q8N196	739 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	ATP8B4	Q8TF62	1192 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	WNT8B	Q93098	351 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	DLGAP2	Q9P1A6	1054 aa		13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	SMG5	Q9UPR3	1016 aa	Known RBP	13.98	□□□□□ -0.17
ABCD4-222	ENST00000555617	FREM2	Q5SZK8	3169 aa		13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	PER2	O15055	1255 aa		13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	MYL3	P08590	195 aa		13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	ABCB5	Q2M3G0	1257 aa		13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	DDX11	Q96FC9	970 aa		13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	OSBPL7	Q9BZF2	842 aa		13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	BICC1	Q9H694	974 aa	Known RBP	13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	RALGAPA1	Q6GYQ0	2036 aa		13.97	□□□□□ -0.17
ABCD4-222	ENST00000555617	VWA5A	O00534	786 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	EFCAB14	O75071	495 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	MAP4K4	O95819	1239 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	AMH	P03971	560 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	DCN	P07585	359 aa	Known RBP	13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	CKB	P12277	381 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	CNTN2	Q02246	1040 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	SPEM2	Q0P670	501 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	SPECC1	Q5M775	1068 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	SYCE2	Q6PIF2	218 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	PI16	Q6UXB8	463 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	TBC1D9	Q6ZT07	1266 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	POMK	Q9H5K3	350 aa		13.96	□□□□□ -0.17
ABCD4-222	ENST00000555617	CELSR3	Q9NYQ7	3312 aa		13.96	□□□□□ -0.18
ABCD4-222	ENST00000555617	KALRN	O60229	2985 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	TOP3B	O95985	862 aa	Known RBP	13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	RB1	P06400	928 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	SHMT1	P34896	483 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	EVX2	Q03828	476 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	RABL6	Q3YEC7	729 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	CCDC102B	Q68D86	513 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	GDF6	Q6KF10	455 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	TAPT1	Q6NXT6	567 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	NFRKB	Q6P4R8	1299 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	ERICH6	Q7L0X2	663 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	ATG9A	Q7Z3C6	839 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	PDZD3	Q86UT5	571 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	SIAH1	Q8IUQ4	282 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	DBF4B	Q8NFT6	615 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	CAGE1	Q8TC20	777 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	GATA6	Q92908	595 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	MAP4K1	Q92918	833 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	TOP1MT	Q969P6	601 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	ANKFY1	Q9P2R3	1169 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	LIMD1	Q9UGP4	676 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	PLAGL2	Q9UPG8	496 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	WASF3	Q9UPY6	502 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	CFAP46	Q8IYW2	2715 aa		13.95	□□□□□ -0.18
ABCD4-222	ENST00000555617	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	KRBA1	A5PL33	1030 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	GLUL	P15104	373 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	RBL2	Q08999	1139 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	PTGIS	Q16647	500 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	DOPEY1	Q5JWR5	2465 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	C19orf48	Q6RUI8	117 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	ADGRA1	Q86SQ6	560 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	C1orf210	Q8IVY1	113 aa		13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	FBXO16	Q8IX29	292 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCD4-222	ENST00000555617	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.94	□□□□□ -0.18

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