RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 ATP11BQ9Y2G3 1177 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 Q9Y3F1 56 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 LTBP2Q14767 1821 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 ELP1O95163 1332 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 K7ELQ4 463 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-215ENST00000555616 ASGR1P07306 291 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 KIF5BP33176 963 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 LIFRP42702 1097 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 HSD17B4P51659 736 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-215ENST00000555616 PDE4DQ08499 809 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 TRAF1Q13077 416 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 DUSP28Q4G0W2 176 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 GNASQ5JWF2 1037 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 EEPD1Q7L9B9 569 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 ANKRD33Q7Z3H0 272 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 BRF1Q92994 677 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 ZSCAN31Q96LW9 406 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-215ENST00000555616 PIGSQ96S52 555 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 MYL10Q9BUA6 226 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 SPZ1Q9BXG8 430 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 STARD7Q9NQZ5 370 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 PDLIM7Q9NR12 457 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 LIMCH1Q9UPQ0 1083 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 PCDHA1Q9Y5I3 950 aa11.13□□□□□ -0.63
ACTN1-215ENST00000555616 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 B4DLN1 442 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 PTGS1P23219 599 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 SMARCA1P28370 1054 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 MRPL12P52815 198 aaKnown RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 TLE2Q04725 743 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 TOB2Q14106 344 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 FSCN1Q16658 493 aaKnown RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 SYNE3Q6ZMZ3 975 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 NFXL1Q6ZNB6 911 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 SAMD3Q8N6K7 520 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 NSUN6Q8TEA1 469 aaKnown RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 SCFD2Q8WU76 684 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 TBC1D5Q92609 795 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 GLT1D1Q96MS3 346 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 TOX2Q96NM4 488 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 LZTS2Q9BRK4 669 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 AGXT2Q9BYV1 514 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 WDR11Q9BZH6 1224 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 SH2B1Q9NRF2 756 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
ACTN1-215ENST00000555616 PRKAG2Q9UGJ0 569 aa11.12□□□□□ -0.63
ACTN1-215ENST00000555616 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-215ENST00000555616 NKRFO15226 690 aaKnown RBP eCLIP11.11□□□□□ -0.636e-6■■□□□ 11.7
ACTN1-215ENST00000555616 PQBP1O60828 265 aaKnown RBP11.11□□□□□ -0.63
ACTN1-215ENST00000555616 CABYRO75952 493 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
ACTN1-215ENST00000555616 HSP90AA1P07900 732 aaKnown RBP11.11□□□□□ -0.63
ACTN1-215ENST00000555616 CLTBP09497 229 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 CALM1P0DP23 149 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 CALM2P0DP24 149 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 CALM3P0DP25 149 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 GNAQP50148 359 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 BEX3Q00994 111 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 PPP2R5BQ15173 497 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 TAAR1Q96RJ0 339 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 IWS1Q96ST2 819 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 RMDN3Q96TC7 470 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 AP5M1Q9H0R1 490 aa11.11□□□□□ -0.63
ACTN1-215ENST00000555616 NAP1L2Q9ULW6 460 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-215ENST00000555616 MROH7Q68CQ1 1323 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 KLF18A0A0U1RQI7 1052 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 TRIM43BA6NCK2 446 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 GOLGA8BA8MQT2 603 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 KIAA0355O15063 1070 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 DYNC1LI2O43237 492 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-215ENST00000555616 PLEKHA8P1O95397 391 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 CFBP00751 764 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 CDK7P50613 346 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 EVCP57679 992 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 APOBRQ0VD83 1088 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 CCDC62Q6P9F0 684 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 SH3RF1Q7Z6J0 888 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 TDHQ8IZJ6 230 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 TRIM43Q96BQ3 446 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-215ENST00000555616 RRP36Q96EU6 259 aaKnown RBP11.1□□□□□ -0.63
ACTN1-215ENST00000555616 ZNF274Q96GC6 653 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-215ENST00000555616 TMX3Q96JJ7 454 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 LBHD1Q9BQE6 289 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-215ENST00000555616 UBE2OQ9C0C9 1292 aaKnown RBP11.1□□□□□ -0.63
ACTN1-215ENST00000555616 PRDM5Q9NQX1 630 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-215ENST00000555616 PXMP2Q9NR77 195 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
ACTN1-215ENST00000555616 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms