RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.75□□□□□ -0.37
TDP1-212ENST00000555565 MORC4Q8TE76 937 aa12.75□□□□□ -0.37
TDP1-212ENST00000555565 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
TDP1-212ENST00000555565 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
TDP1-212ENST00000555565 RNF146Q9NTX7 359 aa12.75□□□□□ -0.37
TDP1-212ENST00000555565 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
TDP1-212ENST00000555565 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
TDP1-212ENST00000555565 MTMR7Q9Y216 660 aa12.75□□□□□ -0.37
TDP1-212ENST00000555565 SDSP20132 328 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 RFC2P35250 354 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 HAND2P61296 217 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 PURAQ00577 322 aaKnown RBP12.74□□□□□ -0.37
TDP1-212ENST00000555565 NHLH1Q02575 133 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
TDP1-212ENST00000555565 EEPD1Q7L9B9 569 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 FBXO16Q8IX29 292 aaPredicted RBP12.74□□□□□ -0.37
TDP1-212ENST00000555565 GJD3Q8N144 294 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 SNX27Q96L92 541 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
TDP1-212ENST00000555565 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
TDP1-212ENST00000555565 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 RBAK-RBAKDNI3L0D1 243 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
TDP1-212ENST00000555565 ACTN1P12814 892 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 ALAS1P13196 640 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 CCDC96Q2M329 555 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 LEXMQ3ZCV2 418 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 DUSP28Q4G0W2 176 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 MUM1L1Q5H9M0 696 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 TTBK2Q6IQ55 1244 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 TMCO2Q7Z6W1 182 aaPredicted RBP12.73□□□□□ -0.37
TDP1-212ENST00000555565 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 PPP1R13LQ8WUF5 828 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 TRERF1Q96PN7 1200 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 CTAGE1Q96RT6 745 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 TMEM47Q9BQJ4 181 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 UBE2ZQ9H832 354 aaPredicted RBP12.73□□□□□ -0.37
TDP1-212ENST00000555565 SUGCTQ9HAC7 445 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 CYP39A1Q9NYL5 469 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 TET1Q8NFU7 2136 aa12.73□□□□□ -0.37
TDP1-212ENST00000555565 KIF28PB7ZC32 967 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 IL9P15248 144 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 SLC16A2P36021 539 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 NBPF20Q3BBV1 942 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 BTNL9Q6UXG8 535 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 KIAA1211Q6ZU35 1233 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 GDPD5Q8WTR4 605 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 FBXL18Q96ME1 805 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
TDP1-212ENST00000555565 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.37
TDP1-212ENST00000555565 LCTP09848 1927 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 RBM47A0AV96 593 aaKnown RBP12.71□□□□□ -0.37
TDP1-212ENST00000555565 BAIAP3O94812 1187 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 ICAM1P05362 532 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.37
TDP1-212ENST00000555565 MFAP1P55081 439 aaKnown RBP12.71□□□□□ -0.37
TDP1-212ENST00000555565 TCTN1Q2MV58 587 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 CWC27Q6UX04 472 aaKnown RBP12.71□□□□□ -0.37
TDP1-212ENST00000555565 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 ANKS1AQ92625 1134 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 RANBP17Q9H2T7 1088 aaKnown RBP12.71□□□□□ -0.37
TDP1-212ENST00000555565 VTA1Q9NP79 307 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 CCPG1Q9ULG6 757 aa12.71□□□□□ -0.37
TDP1-212ENST00000555565 NEDD4P46934 1319 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
TDP1-212ENST00000555565 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 PDHBP11177 359 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 ERVK-21P61565 698 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 WDR5P61964 334 aaKnown RBP12.7□□□□□ -0.38
TDP1-212ENST00000555565 DEFB103AP81534 67 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 TTC14Q96N46 770 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 MTG1Q9BT17 334 aaPredicted RBP12.7□□□□□ -0.38
TDP1-212ENST00000555565 WDR11Q9BZH6 1224 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
TDP1-212ENST00000555565 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
TDP1-212ENST00000555565 GPCPD1Q9NPB8 672 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 DIAPH3Q9NSV4 1193 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
TDP1-212ENST00000555565 USP34Q70CQ2 3546 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 SCN10AQ9Y5Y9 1956 aa12.7□□□□□ -0.38
TDP1-212ENST00000555565 ZNF213O14771 459 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 MYL3P08590 195 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 ALADP13716 330 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 KCNA5P22460 613 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 NSMFQ6X4W1 530 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 NEK9Q8TD19 979 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 ESR2Q92731 530 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
TDP1-212ENST00000555565 LINC01553A4QN01 128 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms