RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF165P49910 485 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 ZNF445P59923 1031 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 FBXL19Q6PCT2 694 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 DCP2Q8IU60 420 aaKnown RBP6.06□□□□□ -1.44
SRP54-207ENST00000555535 FIBCD1Q8N539 461 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 USP33Q8TEY7 942 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 CHFRQ96EP1 664 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.06□□□□□ -1.44
SRP54-207ENST00000555535 RWDD3Q9Y3V2 267 aa6.06□□□□□ -1.44
SRP54-207ENST00000555535 TRBV23OR9-2A0A075B6M9 112 aa6.05□□□□□ -1.44
SRP54-207ENST00000555535 A0A087WZG4 1122 aa6.05□□□□□ -1.44
SRP54-207ENST00000555535 ZNF623O75123 536 aa6.05□□□□□ -1.44
SRP54-207ENST00000555535 PMS1P54277 932 aaKnown RBP6.05□□□□□ -1.44
SRP54-207ENST00000555535 CEP89Q96ST8 783 aa6.05□□□□□ -1.44
SRP54-207ENST00000555535 SLC9A7Q96T83 725 aa6.05□□□□□ -1.44
SRP54-207ENST00000555535 AP5M1Q9H0R1 490 aa6.05□□□□□ -1.44
SRP54-207ENST00000555535 PPFIA2O75334 1257 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 CYP7B1O75881 506 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 ITGA4P13612 1032 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 IFNGR1P15260 489 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 EIF4A3P38919 411 aaKnown RBP6.04□□□□□ -1.44
SRP54-207ENST00000555535 ITGA1P56199 1179 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 DPTQ07507 201 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 PRAMEF18Q5VWM3 479 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 PKN3Q6P5Z2 889 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 CD300LDQ6UXZ3 194 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 MIB1Q86YT6 1006 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 MTA3Q9BTC8 594 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 TMEM168Q9H0V1 697 aa6.04□□□□□ -1.44
SRP54-207ENST00000555535 DIS3Q9Y2L1 958 aaKnown RBP6.04□□□□□ -1.44
SRP54-207ENST00000555535 C9IYK1 514 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 NPIPB8E9PQR5 432 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 CLCQ05315 142 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 FOXE3Q13461 319 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 BRF1Q92994 677 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 WWC2-AS2Q96NR7 200 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 L2HGDHQ9H9P8 463 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 KBTBD4Q9NVX7 518 aa6.03□□□□□ -1.44
SRP54-207ENST00000555535 ZNF28P17035 718 aa6.02□□□□□ -1.45
SRP54-207ENST00000555535 CD247P20963 164 aa6.02□□□□□ -1.45
SRP54-207ENST00000555535 MCM7P33993 719 aa6.02□□□□□ -1.45
SRP54-207ENST00000555535 MIIPQ5JXC2 388 aa6.02□□□□□ -1.45
SRP54-207ENST00000555535 RNF34Q969K3 372 aa6.02□□□□□ -1.45
SRP54-207ENST00000555535 IVNS1ABPQ9Y6Y0 642 aa6.02□□□□□ -1.45
SRP54-207ENST00000555535 SORBS3O60504 671 aa6.01□□□□□ -1.45
SRP54-207ENST00000555535 MCM4P33991 863 aa6.01□□□□□ -1.45
SRP54-207ENST00000555535 PRKD1Q15139 912 aaPredicted RBP6.01□□□□□ -1.45
SRP54-207ENST00000555535 TCEAL1Q15170 157 aa6.01□□□□□ -1.45
SRP54-207ENST00000555535 SEZ6Q53EL9 994 aa6.01□□□□□ -1.45
SRP54-207ENST00000555535 ERMP1Q7Z2K6 904 aa6.01□□□□□ -1.45
SRP54-207ENST00000555535 FBLN5Q9UBX5 448 aa6.01□□□□□ -1.45
SRP54-207ENST00000555535 AURKAO14965 403 aa6□□□□□ -1.45
SRP54-207ENST00000555535 NPHS1O60500 1241 aa6□□□□□ -1.45
SRP54-207ENST00000555535 SEPHS1P49903 392 aa6□□□□□ -1.45
SRP54-207ENST00000555535 KCNA1Q09470 495 aa6□□□□□ -1.45
SRP54-207ENST00000555535 DCAF15Q66K64 600 aa6□□□□□ -1.45
SRP54-207ENST00000555535 KBTBD2Q8IY47 623 aa6□□□□□ -1.45
SRP54-207ENST00000555535 TAB3Q8N5C8 712 aaPredicted RBP6□□□□□ -1.45
SRP54-207ENST00000555535 ZNF296Q8WUU4 475 aaPredicted RBP6□□□□□ -1.45
SRP54-207ENST00000555535 MBD6Q96DN6 1003 aa6□□□□□ -1.45
SRP54-207ENST00000555535 YTHDC1Q96MU7 727 aaKnown RBP6□□□□□ -1.45
SRP54-207ENST00000555535 ZDHHC15Q96MV8 337 aa6□□□□□ -1.45
SRP54-207ENST00000555535 NOL6Q9H6R4 1146 aaKnown RBP6□□□□□ -1.45
SRP54-207ENST00000555535 ZNF202O95125 648 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 NTRK1P04629 796 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 IMPDH2P12268 514 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 CRKP46108 304 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 NANOS3P60323 173 aaKnown RBP5.99□□□□□ -1.45
SRP54-207ENST00000555535 APOBRQ0VD83 1088 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 AXDND1Q5T1B0 1012 aaPredicted RBP5.99□□□□□ -1.45
SRP54-207ENST00000555535 RNF207Q6ZRF8 634 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 KLHL36Q8N4N3 616 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 Q8TCH9 128 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 WRNIP1Q96S55 665 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 MRS2Q9HD23 443 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 GULP1Q9UBP9 304 aa5.99□□□□□ -1.45
SRP54-207ENST00000555535 PAMP19021 973 aa5.98□□□□□ -1.45
SRP54-207ENST00000555535 IL13P35225 146 aa5.98□□□□□ -1.45
SRP54-207ENST00000555535 INHBCP55103 352 aa5.98□□□□□ -1.45
SRP54-207ENST00000555535 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
SRP54-207ENST00000555535 FAM126BQ8IXS8 530 aa5.98□□□□□ -1.45
SRP54-207ENST00000555535 FAM26EQ8N5C1 309 aa5.98□□□□□ -1.45
SRP54-207ENST00000555535 SEC14L1Q92503 715 aa5.98□□□□□ -1.45
SRP54-207ENST00000555535 ZNF503Q96F45 646 aa5.98□□□□□ -1.45
SRP54-207ENST00000555535 ANKRD33BA6NCL7 494 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 PPP1R11O60927 126 aaPredicted RBP5.97□□□□□ -1.45
SRP54-207ENST00000555535 NKX3-2P78367 333 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 DNAJC10Q8IXB1 793 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 CLIC6Q96NY7 704 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 TRIM8Q9BZR9 551 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 IKZF4Q9H2S9 585 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 BARX1Q9HBU1 254 aaPredicted RBP5.97□□□□□ -1.45
SRP54-207ENST00000555535 FTSJ1Q9UET6 329 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 SIT1Q9Y3P8 196 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 ZNF451Q9Y4E5 1061 aa5.97□□□□□ -1.45
SRP54-207ENST00000555535 NPHP3-ACAD11A0A0J9YXS1 232 aa5.96□□□□□ -1.46
SRP54-207ENST00000555535 FUCA1P04066 466 aa5.96□□□□□ -1.46
SRP54-207ENST00000555535 SLC6A11P48066 632 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms