RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ZSCAN22P10073 491 aaPredicted RBP11.31□□□□□ -0.6
PSEN1-213ENST00000555386 SCG2P13521 617 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 CNGA1P29973 690 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 CCDC173Q0VFZ6 552 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 MTFR1Q15390 333 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 UBE2SQ16763 222 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 ZNF792Q3KQV3 632 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 MFSD14CQ5VZR4 134 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 EEPD1Q7L9B9 569 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 STXBP3O00186 592 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 JAK2O60674 1132 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 CDKL5O76039 1030 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 HMGCRP04035 888 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 POLR2MP0CAP2 368 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 UBXN2AP68543 259 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 TRAF1Q13077 416 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 CSPP1Q1MSJ5 1256 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 USP17L6PQ6QN14 398 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 SYTL5Q8TDW5 730 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 ABHD8Q96I13 439 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 PPP1R9BQ96SB3 815 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 PSTPIP2Q9H939 334 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 VPS54Q9P1Q0 977 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 COL20A1Q9P218 1284 aa11.3□□□□□ -0.6
PSEN1-213ENST00000555386 MKI67P46013 3256 aaKnown RBP11.3□□□□□ -0.6
PSEN1-213ENST00000555386 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 HOXC6P09630 235 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
PSEN1-213ENST00000555386 PDCP20941 246 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 SYT1P21579 422 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-213ENST00000555386 CACNB2Q08289 660 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-213ENST00000555386 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 PKN1Q16512 942 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 ARHGEF16Q5VV41 709 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 ANO1Q5XXA6 986 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 LRSAM1Q6UWE0 723 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 CUL5Q93034 780 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 PGBD1Q96JS3 809 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 FGD4Q96M96 766 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 RMDN3Q96TC7 470 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 TINF2Q9BSI4 451 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 RNF26Q9BY78 433 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-213ENST00000555386 RNF208Q9H0X6 261 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 UNC93B1Q9H1C4 597 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 BARHL2Q9NY43 387 aa11.29□□□□□ -0.6
PSEN1-213ENST00000555386 ORC3Q9UBD5 711 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-213ENST00000555386 ZHX1Q9UKY1 873 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-213ENST00000555386 F13A1P00488 732 aa11.28□□□□□ -0.6
PSEN1-213ENST00000555386 MYCLP12524 364 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-213ENST00000555386 CCL5P13501 91 aa11.28□□□□□ -0.6
PSEN1-213ENST00000555386 ALDH5A1P51649 535 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-213ENST00000555386 ADCY7P51828 1080 aa11.28□□□□□ -0.6
PSEN1-213ENST00000555386 ARMCX2Q7L311 632 aa11.28□□□□□ -0.6
PSEN1-213ENST00000555386 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
PSEN1-213ENST00000555386 GJB4Q9NTQ9 266 aa11.28□□□□□ -0.6
PSEN1-213ENST00000555386 ADD3Q9UEY8 706 aaKnown RBP11.28□□□□□ -0.6
PSEN1-213ENST00000555386 ASTN1O14525 1302 aa11.28□□□□□ -0.6
PSEN1-213ENST00000555386 KIAA1217Q5T5P2 1943 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 ADAMTS3O15072 1205 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 DEXIO95424 95 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 GJB2P29033 226 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 SOX10P56693 466 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 NLRP5P59047 1200 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 PDE4DQ08499 809 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 RGS22Q8NE09 1264 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 NSUN7Q8NE18 718 aaKnown RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 TRPV1Q8NER1 839 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 TRIM44Q96DX7 344 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 ZNF333Q96JL9 665 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 HMX1Q9NP08 348 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 TMEM260Q9NX78 707 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 TMEM63CQ9P1W3 806 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 KCNJ14Q9UNX9 436 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.6
PSEN1-213ENST00000555386 DIS3Q9Y2L1 958 aaKnown RBP11.27□□□□□ -0.6
PSEN1-213ENST00000555386 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 ASB14A6NK59 587 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 SNAI1O95863 264 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms