RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 MYH4Q9Y623 1939 aa14.74□□□□□ -0.05
TMEM253-205ENST00000555314 CA3P07451 260 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 IQCF3P0C7M6 154 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 MX1P20591 662 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 NT5C2P49902 561 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 SNAP25P60880 206 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 CTDSPL2Q05D32 466 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 PDE4DQ08499 809 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 OR6J1Q8NGC5 347 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 LMCD1Q9NZU5 365 aa14.73□□□□□ -0.05
TMEM253-205ENST00000555314 ZMYM6O95789 1325 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 PTPDC1A2A3K4 754 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 MYL3P08590 195 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 SNHG28P0DPA3 235 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 SLC16A2P36021 539 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 RPS6P62753 249 aaKnown RBP14.72□□□□□ -0.05
TMEM253-205ENST00000555314 TAP1Q03518 808 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 RBL2Q08999 1139 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 TTBK2Q6IQ55 1244 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 DEFB128Q7Z7B8 93 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 SESTD1Q86VW0 696 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 HERC6Q8IVU3 1022 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 CCDC155Q8N6L0 562 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 CAGE1Q8TC20 777 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 AFAP1L1Q8TED9 768 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 PURBQ96QR8 312 aaKnown RBP14.72□□□□□ -0.05
TMEM253-205ENST00000555314 TMEM47Q9BQJ4 181 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
TMEM253-205ENST00000555314 PDHBP11177 359 aa14.71□□□□□ -0.05
TMEM253-205ENST00000555314 TFF2Q03403 129 aa14.71□□□□□ -0.05
TMEM253-205ENST00000555314 ZNF543Q08ER8 600 aa14.71□□□□□ -0.05
TMEM253-205ENST00000555314 FAM47CQ5HY64 1035 aa14.71□□□□□ -0.05
TMEM253-205ENST00000555314 EVI5LQ96CN4 794 aa14.71□□□□□ -0.05
TMEM253-205ENST00000555314 INCENPQ9NQS7 918 aa14.71□□□□□ -0.05
TMEM253-205ENST00000555314 TXNP10599 105 aaKnown RBP14.7□□□□□ -0.06
TMEM253-205ENST00000555314 CALML3P27482 149 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 SKIV2LQ15477 1246 aaKnown RBP14.7□□□□□ -0.06
TMEM253-205ENST00000555314 GPATCH4Q5T3I0 446 aaKnown RBP14.7□□□□□ -0.06
TMEM253-205ENST00000555314 CCDC62Q6P9F0 684 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 SLC30A10Q6XR72 485 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 RASGRP2Q7LDG7 609 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 MICALL1Q8N3F8 863 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 HLA-CQ95604 372 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 FAM122AQ96E09 287 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 FTOQ9C0B1 505 aaKnown RBP eCLIP14.7□□□□□ -0.06
TMEM253-205ENST00000555314 NOD1Q9Y239 953 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 SCN10AQ9Y5Y9 1956 aa14.7□□□□□ -0.06
TMEM253-205ENST00000555314 LRRC37A2A6NM11 1700 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 SALL3Q9BXA9 1300 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 XIRP2A4UGR9 3374 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 BRWD1Q9NSI6 2320 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 TLL1O43897 1013 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 EFCAB14O75071 495 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 FGAP02671 866 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 KCNQ1P51787 676 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
TMEM253-205ENST00000555314 PTGISQ16647 500 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 VPS53Q5VIR6 699 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 OTUD7AQ8TE49 926 aaPredicted RBP14.69□□□□□ -0.06
TMEM253-205ENST00000555314 CHMP4CQ96CF2 233 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 MTMR7Q9Y216 660 aa14.69□□□□□ -0.06
TMEM253-205ENST00000555314 SELPP16109 830 aa14.68□□□□□ -0.06
TMEM253-205ENST00000555314 KCNJ6P48051 423 aa14.68□□□□□ -0.06
TMEM253-205ENST00000555314 ARNTL2Q8WYA1 636 aa14.68□□□□□ -0.06
TMEM253-205ENST00000555314 EMID1Q96A84 441 aaPredicted RBP14.68□□□□□ -0.06
TMEM253-205ENST00000555314 NECAB3Q96P71 396 aaPredicted RBP14.68□□□□□ -0.06
TMEM253-205ENST00000555314 IWS1Q96ST2 819 aa14.68□□□□□ -0.06
TMEM253-205ENST00000555314 GPCPD1Q9NPB8 672 aa14.68□□□□□ -0.06
TMEM253-205ENST00000555314 TOMM22Q9NS69 142 aa14.68□□□□□ -0.06
TMEM253-205ENST00000555314 ABHD14A-ACY1A0A1B0GW23 586 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 EPOPA6NHQ4 379 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 RFXAPO00287 272 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 GH1P01241 217 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 CXCL10P02778 98 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 CASTP20810 708 aaKnown RBP14.67□□□□□ -0.06
TMEM253-205ENST00000555314 GRB10Q13322 594 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 MCMDC2Q4G0Z9 681 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 CCDC178Q5BJE1 867 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 DGKHQ86XP1 1220 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 SPRYD3Q8NCJ5 442 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 NSUN6Q8TEA1 469 aaKnown RBP14.67□□□□□ -0.06
TMEM253-205ENST00000555314 CTAGE1Q96RT6 745 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 RNF41Q9H4P4 317 aaPredicted RBP14.67□□□□□ -0.06
TMEM253-205ENST00000555314 PCDHB15Q9Y5E8 787 aa14.67□□□□□ -0.06
TMEM253-205ENST00000555314 FRMPD2Q68DX3 1309 aaPredicted RBP14.66□□□□□ -0.06
TMEM253-205ENST00000555314 LPXNO60711 386 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 HSPD1P10809 573 aaKnown RBP14.66□□□□□ -0.06
TMEM253-205ENST00000555314 WDR5P61964 334 aaKnown RBP14.66□□□□□ -0.06
TMEM253-205ENST00000555314 CNKSR3Q6P9H4 555 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 MFSD6Q6ZSS7 791 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 LRRC8DQ7L1W4 858 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 MCF2L2Q86YR7 1114 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 AFG1LQ8WV93 481 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 RAD9AQ99638 391 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 RAPGEFL1Q9UHV5 662 aa14.66□□□□□ -0.06
TMEM253-205ENST00000555314 MUC6Q6W4X9 2439 aa14.65□□□□□ -0.06
TMEM253-205ENST00000555314 GPR37L1O60883 481 aa14.65□□□□□ -0.06
TMEM253-205ENST00000555314 ARHGEF15O94989 841 aa14.65□□□□□ -0.06
TMEM253-205ENST00000555314 ARIH2O95376 493 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms