RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 FBXO46Q6PJ61 603 aaPredicted RBP16.35■□□□□ 0.21
CHD8-208ENST00000555301 FGD4Q96M96 766 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 PURBQ96QR8 312 aaKnown RBP16.35■□□□□ 0.21
CHD8-208ENST00000555301 IWS1Q96ST2 819 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 TINF2Q9BSI4 451 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 PXMP2Q9NR77 195 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 BIN2Q9UBW5 565 aaPredicted RBP16.35■□□□□ 0.21
CHD8-208ENST00000555301 PCDHA6Q9UN73 950 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 PCDHA8Q9Y5H6 950 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 PTCH2Q9Y6C5 1203 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 H3BQV1 296 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 EIF2AK2P19525 551 aaKnown RBP16.34■□□□□ 0.21
CHD8-208ENST00000555301 GRK4P32298 578 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 FOSBP53539 338 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 NPY5RQ15761 445 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 CCL14Q16627 93 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 JAKMIP3Q5VZ66 844 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 MFSD14CQ5VZR4 134 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 DIS3L2Q8IYB7 885 aaKnown RBP16.34■□□□□ 0.21
CHD8-208ENST00000555301 MORC4Q8TE76 937 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 TRIB2Q92519 343 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 PDCD2LQ9BRP1 358 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 FRMPD4Q14CM0 1322 aa16.34■□□□□ 0.21
CHD8-208ENST00000555301 M0R2N6 131 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 HMGCRP04035 888 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 PDIA4P13667 645 aaKnown RBP16.33■□□□□ 0.2
CHD8-208ENST00000555301 EDNRBP24530 442 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 GUCY1B3Q02153 619 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 PDE4DQ08499 809 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 XRRA1Q6P2D8 792 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 ARMCX2Q7L311 632 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 ANO3Q9BYT9 981 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 TMEM260Q9NX78 707 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 FLRT1Q9NZU1 646 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.2
CHD8-208ENST00000555301 ASTN1O14525 1302 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 RPTORQ8N122 1335 aa16.33■□□□□ 0.2
CHD8-208ENST00000555301 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 IGHA2P01877 340 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 NR3C2P08235 984 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 ELNP15502 786 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
CHD8-208ENST00000555301 PGM5Q15124 567 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 STXBP2Q15833 593 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 RASGRP4Q8TDF6 673 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 FOXP1Q9H334 677 aaPredicted RBP16.32■□□□□ 0.2
CHD8-208ENST00000555301 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.32■□□□□ 0.2
CHD8-208ENST00000555301 DAXXQ9UER7 740 aaPredicted RBP16.32■□□□□ 0.2
CHD8-208ENST00000555301 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 CNPY2Q9Y2B0 182 aa16.32■□□□□ 0.2
CHD8-208ENST00000555301 ZSWIM8A7E2V4 1837 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 BTBD18B2RXH4 712 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 ADAMTS3O15072 1205 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
CHD8-208ENST00000555301 STAM2O75886 525 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 CCND2P30279 289 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 CYP2C19P33261 490 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 SREBF1P36956 1147 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 NONOQ15233 471 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHD8-208ENST00000555301 SLC9C1Q4G0N8 1177 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 PCNX4Q63HM2 1172 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 VSIG10LQ86VR7 867 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 SPRYD3Q8NCJ5 442 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 PGBD1Q96JS3 809 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 ABHD16BQ9H3Z7 469 aa16.31■□□□□ 0.2
CHD8-208ENST00000555301 SNAI1O95863 264 aaPredicted RBP16.3■□□□□ 0.2
CHD8-208ENST00000555301 MYCLP12524 364 aaPredicted RBP16.3■□□□□ 0.2
CHD8-208ENST00000555301 SYT1P21579 422 aa16.3■□□□□ 0.2
CHD8-208ENST00000555301 UBXN2AP68543 259 aa16.3■□□□□ 0.2
CHD8-208ENST00000555301 NR5A1Q13285 461 aa16.3■□□□□ 0.2
CHD8-208ENST00000555301 TNFRSF25Q93038 417 aa16.3■□□□□ 0.2
CHD8-208ENST00000555301 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
CHD8-208ENST00000555301 MGAMO43451 1857 aa16.3■□□□□ 0.2
CHD8-208ENST00000555301 MYH6P13533 1939 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 INHAP05111 366 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 ARHGAP4P98171 946 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 TBCKQ8TEA7 893 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 SH3TC2Q8TF17 1288 aa16.29■□□□□ 0.2
CHD8-208ENST00000555301 VPS37CA5D8V6 355 aaPredicted RBP16.28■□□□□ 0.2
CHD8-208ENST00000555301 STX6O43752 255 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 CYP3A4P08684 503 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
CHD8-208ENST00000555301 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHD8-208ENST00000555301 USP11P51784 963 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 CACNB2Q08289 660 aaPredicted RBP16.28■□□□□ 0.2
CHD8-208ENST00000555301 GNPTABQ3T906 1256 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 MAP3K21Q5TCX8 1036 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 MCTP1Q6DN14 999 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 CRYGNQ8WXF5 182 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 MCOLN1Q9GZU1 580 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms