RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 IL16Q14005 1332 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 ATE1O95260 518 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 FGRP09769 529 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 HOXA10P31260 410 aaPredicted RBP5.34□□□□□ -1.55
CPSF2-204ENST00000555244 ASPAP45381 313 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 CDK8P49336 464 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 USP11P51784 963 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 UVSSAQ2YD98 709 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 LRRFIP1Q32MZ4 808 aaKnown RBP5.34□□□□□ -1.55
CPSF2-204ENST00000555244 PARP10Q53GL7 1025 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 ARTNQ5T4W7 220 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 FBXW10Q5XX13 1052 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 TTLL7Q6ZT98 887 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 CDC37L1Q7L3B6 337 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 NBPF11Q86T75 865 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 MCF2L2Q86YR7 1114 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 C2CD5Q86YS7 1000 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 CCDC146Q8IYE0 955 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 DZIP1LQ8IYY4 767 aaKnown RBP5.34□□□□□ -1.55
CPSF2-204ENST00000555244 CNBD1Q8NA66 436 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 RNF214Q8ND24 703 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 ZNF507Q8TCN5 953 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 MASTLQ96GX5 879 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 SRRTQ9BXP5 876 aaKnown RBP5.34□□□□□ -1.55
CPSF2-204ENST00000555244 CHMP4AQ9BY43 222 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 WNT10AQ9GZT5 417 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 NYXQ9GZU5 481 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 EHMT1Q9H9B1 1298 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 ADAM30Q9UKF2 790 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 NIP7Q9Y221 180 aaKnown RBP eCLIP5.34□□□□□ -1.55
CPSF2-204ENST00000555244 HIF3AQ9Y2N7 669 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 PCDHB14Q9Y5E9 798 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 ANKRD31Q8N7Z5 1873 aa5.34□□□□□ -1.55
CPSF2-204ENST00000555244 SNED1Q8TER0 1413 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 ANP32CO43423 234 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 STK10O94804 968 aaKnown RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 HTR3BO95264 441 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 NTSR2O95665 410 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 PGRP06401 933 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 DRD2P14416 443 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 NPR1P16066 1061 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 PLCG1P19174 1290 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 GRK4P32298 578 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 PIP4K2AP48426 406 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 PRELPP51888 382 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 EIF6P56537 245 aaKnown RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 C1QTNF8P60827 252 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 GNAI1P63096 354 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 ST5P78524 1137 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 CLCQ05315 142 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 RING1Q06587 406 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 PROSER3Q2NL68 480 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 HSP90AB3PQ58FF7 597 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 PPM1JQ5JR12 505 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 SOGA3Q5TF21 947 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 Q6ZS46 218 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 ARHGAP27Q6ZUM4 889 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 NBPF5PQ86XG9 351 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 OR6P1Q8NGX9 317 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 SSU72Q9NP77 194 aaKnown RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 DISC1Q9NRI5 854 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 DBF4Q9UBU7 674 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 ZNRF3Q9ULT6 936 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 PPT2Q9UMR5 302 aa5.33□□□□□ -1.56
CPSF2-204ENST00000555244 POLR3KQ9Y2Y1 108 aaPredicted RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 RRP7AQ9Y3A4 280 aaKnown RBP5.33□□□□□ -1.56
CPSF2-204ENST00000555244 SBF1O95248 1867 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 NUP98P52948 1817 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 UBN2Q6ZU65 1347 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 RNGTTO60942 597 aaKnown RBP5.32□□□□□ -1.56
CPSF2-204ENST00000555244 ALDH1B1P30837 517 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 PREPP48147 710 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 TCIRG1Q13488 830 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 TTLL4Q14679 1199 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 ZBTB37Q5TC79 503 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 SUSD4Q5VX71 490 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 DUSP27Q5VZP5 1158 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 KIF6Q6ZMV9 814 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 COPS6Q7L5N1 327 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 HID1Q8IV36 788 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 WDR63Q8IWG1 891 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 SMYD4Q8IYR2 804 aaPredicted RBP5.32□□□□□ -1.56
CPSF2-204ENST00000555244 C2CD4AQ8NCU7 369 aaPredicted RBP5.32□□□□□ -1.56
CPSF2-204ENST00000555244 PLBD2Q8NHP8 589 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 CRAMP1Q96RY5 1269 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 UBL7Q96S82 380 aaPredicted RBP5.32□□□□□ -1.56
CPSF2-204ENST00000555244 ISCA1Q9BUE6 129 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 GSX1Q9H4S2 264 aaPredicted RBP5.32□□□□□ -1.56
CPSF2-204ENST00000555244 HYPKQ9NX55 129 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 REV1Q9UBZ9 1251 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 R3HCC1Q9Y3T6 440 aaKnown RBP5.32□□□□□ -1.56
CPSF2-204ENST00000555244 CORINQ9Y5Q5 1042 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 ACTL7BQ9Y614 415 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 ARFGEF2Q9Y6D5 1785 aa5.32□□□□□ -1.56
CPSF2-204ENST00000555244 FER1L6Q2WGJ9 1857 aa5.31□□□□□ -1.56
CPSF2-204ENST00000555244 HYAL3O43820 417 aaPredicted RBP5.31□□□□□ -1.56
CPSF2-204ENST00000555244 HCLS1P14317 486 aaPredicted RBP5.31□□□□□ -1.56
CPSF2-204ENST00000555244 MYL6BP14649 208 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms