RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SUPT3HB4E1H0 165 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 GNA14O95837 355 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 CAPZA2P47755 286 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 ZNF75DP51815 510 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 OCRLQ01968 901 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 SPICE1Q8N0Z3 855 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 SPATA5Q8NB90 893 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 FBXL5Q9UKA1 691 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 ZNF202O95125 648 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 KRT1P04264 644 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 MARK3P27448 753 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 CENPAP49450 140 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 DOK7Q18PE1 504 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 KHDRBS2Q5VWX1 349 aaKnown RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 EEPD1Q7L9B9 569 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 CCDC195A0A1B0GUA6 201 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 F5H423 210 aaPredicted RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 DTNBO60941 627 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 IGHDP01880 384 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 GTF2IP78347 998 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 SNCBQ16143 134 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 ARMCX5Q6P1M9 558 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 PLS3P13797 630 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 OSBPP22059 807 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 IFNAR2P48551 515 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 LBRQ14739 615 aaKnown RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 RASIP1Q5U651 963 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 TMTC1Q8IUR5 882 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 B4GALNT2Q8NHY0 566 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 EFHD1Q9BUP0 239 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 FAM49AQ9H0Q0 323 aaPredicted RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 AFF4Q9UHB7 1163 aaKnown RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 NFE2L3Q9Y4A8 694 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 VGLL3A8MV65 326 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 F8W8V4 182 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 HNRNPDLO14979 420 aaKnown RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 MCF2LO15068 1137 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 COBLO75128 1261 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 UBXN2AP68543 259 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 TRIM60Q495X7 471 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 TTC25Q96NG3 672 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 SMAD5Q99717 465 aaKnown RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 PIDD1Q9HB75 910 aa7.46□□□□□ -1.21
SYNE2-216ENST00000555002 SARS2Q9NP81 518 aaKnown RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.21
SYNE2-216ENST00000555002 CFAP69A5D8W1 941 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 E2F6O75461 281 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 TUBB2AQ13885 445 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 TUBB2BQ9BVA1 445 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 OSBPL10Q9BXB5 764 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 NRBP2Q9NSY0 501 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 ARIH2O95376 493 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 ADKP55263 362 aaKnown RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 OSTNP61366 133 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 MESDQ14696 234 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 HIF1AQ16665 826 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 RINLQ6ZS11 566 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 SCYL3Q8IZE3 742 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 ZNF212Q9UDV6 495 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 INO80B-WBP1J3KQ70 363 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 SLC27A2O14975 620 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 BRD2P25440 801 aaKnown RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 C7orf31Q8N865 590 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 KLHDC4Q8TBB5 520 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 NRBF2Q96F24 287 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 INO80BQ9C086 356 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 ARHGEF9O43307 516 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 TMCC1O94876 653 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 CYP4A11Q02928 519 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 CMTR1Q8N1G2 835 aaKnown RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 EIF4G3O43432 1585 aaKnown RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 TTI1O43156 1089 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 CHEK2O96017 543 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 MAP2K2P36507 400 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 SMAD1Q15797 465 aaKnown RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 ATG16L1Q676U5 607 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 PSDA5PKW4 1024 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 UBXN8O00124 270 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 C11orf74Q86VG3 221 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 MYOCDQ8IZQ8 938 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 PAWRQ96IZ0 340 aaKnown RBP7.46□□□□□ -1.22
SYNE2-216ENST00000555002 ZWILCHQ9H900 591 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 KCNG1Q9UIX4 513 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 PCDHA1Q9Y5I3 950 aa7.46□□□□□ -1.22
SYNE2-216ENST00000555002 TAF11Q15544 211 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 HEXIM2Q96MH2 286 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TYW1Q9NV66 732 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 EFCAB14O75071 495 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SKOR1P84550 965 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SLMAPQ14BN4 828 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 C16orf87Q6PH81 154 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 DIS3L2Q8IYB7 885 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TLK1Q9UKI8 766 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 ZKSCAN5Q9Y2L8 839 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SBNO1A3KN83 1393 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 LUC7L3O95232 432 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 BRD1O95696 1058 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 HSPH1Q92598 858 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 GJA10Q969M2 543 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms