RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 IPO4Q8TEX9 1081 aaKnown RBP4.29□□□□□ -1.72
KTN1-217ENST00000554831 DDX12PQ92771 950 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 MXD3Q9BW11 206 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 RAB21Q9UL25 225 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 KDM6AO15550 1401 aaPredicted RBP4.29□□□□□ -1.72
KTN1-217ENST00000554831 UBE2Q2LH0YL09 131 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 CCDC188H7C350 402 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 STK4Q13043 487 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 DAAM2Q86T65 1068 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 WHAMMQ8TF30 809 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 ERGIC2Q96RQ1 377 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 NSRP1Q9H0G5 558 aaKnown RBP4.29□□□□□ -1.72
KTN1-217ENST00000554831 RAB17Q9H0T7 212 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 EPB41L5Q9HCM4 733 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 CCNL1Q9UK58 526 aaPredicted RBP4.29□□□□□ -1.72
KTN1-217ENST00000554831 SNX12Q9UMY4 172 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 FRMD4BQ9Y2L6 1034 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 PCDHA1Q9Y5I3 950 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 PPP1R3GB7ZBB8 358 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 ATP2B4P23634 1241 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 NR2F2P24468 414 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 EIF6P56537 245 aaKnown RBP4.29□□□□□ -1.72
KTN1-217ENST00000554831 DIXDC1Q155Q3 683 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 C12orf60Q5U649 245 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 HOOK3Q86VS8 718 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 CELF1Q92879 486 aaKnown RBP4.29□□□□□ -1.72
KTN1-217ENST00000554831 NSUN4Q96CB9 384 aaKnown RBP4.29□□□□□ -1.72
KTN1-217ENST00000554831 HINFPQ9BQA5 517 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 RABEP2Q9H5N1 569 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 BARHL2Q9NY43 387 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 AMFRQ9UKV5 643 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 SAMM50Q9Y512 469 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 PXDNQ92626 1479 aa4.29□□□□□ -1.72
KTN1-217ENST00000554831 CCDC169A6NNP5 214 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 PSMD14O00487 310 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SSR1P43307 286 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 LIG3P49916 1009 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 ATP1A2P50993 1020 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 GKAP1Q5VSY0 366 aaPredicted RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 CCNI2Q6ZMN8 369 aaPredicted RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 GPBP1Q86WP2 473 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SMCR8Q8TEV9 937 aaPredicted RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 UBLCP1Q8WVY7 318 aaPredicted RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.28□□□□□ -1.72
KTN1-217ENST00000554831 SPZ1Q9BXG8 430 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 EFCC1Q9HA90 598 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 UTP11Q9Y3A2 253 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 DLG5Q8TDM6 1919 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 BUB1O43683 1085 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CXCR5P32302 372 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CTNNA1P35221 906 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 XDHP47989 1333 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 FAM83BQ5T0W9 1011 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CEP57Q86XR8 500 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 GPIHBP1Q8IV16 184 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 MSL3Q8N5Y2 521 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 CEP63Q96MT8 703 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 LACRTQ9GZZ8 138 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 EMILIN3Q9NT22 766 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 KBTBD4Q9NVX7 518 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 TBC1D7Q9P0N9 293 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 HDAC9Q9UKV0 1011 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 KIAA1024Q9UPX6 916 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 ATP6V0A2Q9Y487 856 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 PCDHA13Q9Y5I0 950 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 USP17L3A6NCW0 530 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 USP17L4A6NCW7 530 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 KRIT1O00522 736 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CALUO43852 315 aaPredicted RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 EXOC3O60645 756 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 TOM1O60784 492 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 BBOX1O75936 387 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 GUCY2FP51841 1108 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 GTF2IP78347 998 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 PDIA5Q14554 519 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 C10orf76Q5T2E6 689 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 PPP4R3CPQ6ZMV5 832 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 ARHGAP27Q6ZUM4 889 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 USP17L1Q7RTZ2 530 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SRLQ86TD4 932 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 AGPAT5Q9NUQ2 364 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 PANK4Q9NVE7 773 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SAMD15Q9P1V8 674 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SWAP70Q9UH65 585 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 GOLGA4Q13439 2230 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 PP2D1A8MPX8 630 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 PGRMC1O00264 195 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 ATP2C2O75185 946 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 BCRP11274 1271 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CALRP27797 417 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 GRIPAP1Q4V328 841 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 KCTD16Q68DU8 428 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 ARMC9Q7Z3E5 817 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CCDC91Q7Z6B0 441 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SH3RF1Q7Z6J0 888 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 DYNLL2Q96FJ2 89 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 RIOK1Q9BRS2 568 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 LSM14BQ9BX40 385 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 AMNQ9BXJ7 453 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms