RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PPP1R11O60927 126 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-214ENST00000554819 SEMA7AO75326 666 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 FUCA1P04066 466 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 DBHP09172 617 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 TMEM253P0C7T8 217 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 SRSF3P84103 164 aaKnown RBP6.08□□□□□ -1.44
SCFD1-214ENST00000554819 MBLAC2Q68D91 279 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 DENND5AQ6IQ26 1287 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 RSPO2Q6UXX9 243 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-214ENST00000554819 SYDE1Q6ZW31 735 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-214ENST00000554819 USP53Q70EK8 1073 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 RCBTB1Q8NDN9 531 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 OSBP2Q969R2 916 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 MCOLN1Q9GZU1 580 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 GPR27Q9NS67 375 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 SIRT5Q9NXA8 310 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 MARCH2Q9P0N8 246 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 KLHL14Q9P2G3 628 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 DBR1Q9UK59 544 aaKnown RBP6.08□□□□□ -1.44
SCFD1-214ENST00000554819 NUDT5Q9UKK9 219 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 TRBV23-1A0A0A0MS06 115 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 ARNTLO00327 626 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 GLI4P10075 376 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 MAPKAPK2P49137 400 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 LSAMPQ13449 338 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
SCFD1-214ENST00000554819 CCDC144BQ3MJ40 725 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 ZNF648Q5T619 568 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-214ENST00000554819 ZC3H14Q6PJT7 736 aaKnown RBP6.07□□□□□ -1.44
SCFD1-214ENST00000554819 RPTNQ6XPR3 784 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 NETO2Q8NC67 525 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 PLEKHO2Q8TD55 490 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 THAP3Q8WTV1 239 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-214ENST00000554819 DPF3Q92784 378 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 TMEM169Q96HH4 297 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 CHAMP1Q96JM3 812 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 ZFYVE21Q9BQ24 234 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 BTG4Q9NY30 223 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 PCDHA2Q9Y5H9 948 aa6.07□□□□□ -1.44
SCFD1-214ENST00000554819 CCDC163A0A0D9SF12 145 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 C22orf46C9J442 243 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 F8W031 263 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-214ENST00000554819 H7BY64 318 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 NFIBO00712 420 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 ZBTB7AO95365 584 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 FAM153BP0C7A2 387 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 VIPR1P32241 457 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 BCL6P41182 706 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
SCFD1-214ENST00000554819 YOD1Q5VVQ6 348 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-214ENST00000554819 CEP68Q76N32 757 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 TRMT2BQ96GJ1 504 aaKnown RBP6.06□□□□□ -1.44
SCFD1-214ENST00000554819 PEX11GQ96HA9 241 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 DHRS4Q9BTZ2 278 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 KCNK12Q9HB15 430 aa6.06□□□□□ -1.44
SCFD1-214ENST00000554819 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 MYOCOSA0A1B0GUC4 107 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 ZC3H12DA2A288 527 aaKnown RBP6.05□□□□□ -1.44
SCFD1-214ENST00000554819 LCP1P13796 627 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 GLDCP23378 1020 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 SLC9A5Q14940 896 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 MROH9Q5TGP6 573 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 WWC2Q6AWC2 1192 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 STYK1Q6J9G0 422 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 TMC6Q7Z403 805 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 TEX2Q8IWB9 1127 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 IFNL3Q8IZI9 196 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 JMYQ8N9B5 988 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 ZSWIM2Q8NEG5 633 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 PHF20Q9BVI0 1012 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 USP35Q9P2H5 1018 aa6.05□□□□□ -1.44
SCFD1-214ENST00000554819 COA3Q9Y2R0 106 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-214ENST00000554819 BTBD11A6QL63 1104 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 ETV2O00321 342 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-214ENST00000554819 TSPAN15O95858 294 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 NTRK1P04629 796 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 C8AP07357 584 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 RAP1GAPP47736 663 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 DLG4P78352 724 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 NTRK3Q16288 839 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 PLEKHN1Q494U1 663 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-214ENST00000554819 C2orf27AQ580R0 203 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 FAM209AQ5JX71 171 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 MAMDC2Q7Z304 686 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-214ENST00000554819 DCP2Q8IU60 420 aaKnown RBP6.04□□□□□ -1.44
SCFD1-214ENST00000554819 RIOX2Q8IUF8 465 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 Q8N1Y9 231 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 PTPRN2Q92932 1015 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 AP5M1Q9H0R1 490 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 CLDND1Q9NY35 253 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 FBLN5Q9UBX5 448 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 MBD1Q9UIS9 605 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-214ENST00000554819 X6R8D5 127 aa6.04□□□□□ -1.44
SCFD1-214ENST00000554819 TCAF2A6NFQ2 919 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 AQP7O14520 342 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 APPP05067 770 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 NAT1P18440 290 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 GPR85P60893 370 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 PRR5P85299 388 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms