RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FSTP19883 344 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 ATP8B2P98198 1209 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 FAM160A1Q05DH4 1040 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 LRRC14Q15048 493 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 KIF4BQ2VIQ3 1234 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 RABL6Q3YEC7 729 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-212ENST00000554486 HP1BP3Q5SSJ5 553 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-212ENST00000554486 BNC2Q6ZN30 1099 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-212ENST00000554486 CNBD1Q8NA66 436 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 MYRFLQ96LU7 910 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 SUGCTQ9HAC7 445 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 PPP1R9AQ9ULJ8 1098 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 HDAC5Q9UQL6 1122 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 RIC1Q4ADV7 1423 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 PNMA6EA0A0J9YXQ4 647 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 TIAF1O95411 115 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 CSF1RP07333 972 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 EIF4A3P38919 411 aaKnown RBP7.8□□□□□ -1.16
SCFD1-212ENST00000554486 CTSWP56202 376 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 MTX1Q13505 466 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 PWP1Q13610 501 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 SCARA3Q6AZY7 606 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 LMBR1LQ6UX01 489 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 ARMC10Q8N2F6 343 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-212ENST00000554486 SMG8Q8ND04 991 aaKnown RBP7.8□□□□□ -1.16
SCFD1-212ENST00000554486 TTLL11Q8NHH1 800 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 TGIF2Q9GZN2 237 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 MTFR1LQ9H019 292 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 ACBD3Q9H3P7 528 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-212ENST00000554486 HIF3AQ9Y2N7 669 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 TAF1P21675 1872 aa7.8□□□□□ -1.16
SCFD1-212ENST00000554486 GAS2O43903 313 aaKnown RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 F13A1P00488 732 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 IGHDP01880 384 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 DRD2P14416 443 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 ERCC5P28715 1186 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 RFX5P48382 616 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 HDAC1Q13547 482 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 INPP5AQ14642 412 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 SF3B3Q15393 1217 aaKnown RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 CLEC10AQ8IUN9 316 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 RPAP2Q8IXW5 612 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 SSH3Q8TE77 659 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 ZNF296Q8WUU4 475 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 EAF1Q96JC9 268 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-212ENST00000554486 RNF112Q9ULX5 631 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 COL4A1P02462 1669 aa7.79□□□□□ -1.16
SCFD1-212ENST00000554486 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 COL11A2P13942 1736 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-212ENST00000554486 KIF13BQ9NQT8 1826 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 KLRG2A4D1S0 409 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-212ENST00000554486 NPHP1O15259 732 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 TMPRSS2O15393 492 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 SRGAP3O43295 1099 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 IGLV1-40P01703 118 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 HSP90B1P14625 803 aaKnown RBP7.78□□□□□ -1.16
SCFD1-212ENST00000554486 CRKP46108 304 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 TNNI2P48788 182 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 ST5P78524 1137 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 CRY2Q49AN0 593 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 ZC3H12AQ5D1E8 599 aaKnown RBP7.78□□□□□ -1.16
SCFD1-212ENST00000554486 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-212ENST00000554486 CCDC84Q86UT8 332 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-212ENST00000554486 ZNF654Q8IZM8 581 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 GOLM1Q8NBJ4 401 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 FBXO27Q8NI29 283 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 BRIP1Q9BX63 1249 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 MIR1-1HGQ9H1L0 117 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 KCNF1Q9H3M0 494 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 GREM2Q9H772 168 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 RTL9Q8NET4 1388 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 SPEF2Q9C093 1822 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 C10orf71Q711Q0 1435 aa7.78□□□□□ -1.16
SCFD1-212ENST00000554486 GFRA2O00451 464 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 CILPO75339 1184 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 BMP3P12645 472 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 PREPP48147 710 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 RING1Q06587 406 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 CCDC152Q4G0S7 254 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 ARTNQ5T4W7 220 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 LRFN4Q6PJG9 635 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 FAM20CQ8IXL6 584 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 KLHDC4Q8TBB5 520 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 GATAD2BQ8WXI9 593 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 CCDC136Q96JN2 1154 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 FAM83CQ9BQN1 747 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 RWDD1Q9H446 243 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-212ENST00000554486 GSX1Q9H4S2 264 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-212ENST00000554486 ZFP64Q9NPA5 681 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 PA2G4Q9UQ80 394 aaKnown RBP7.77□□□□□ -1.17
SCFD1-212ENST00000554486 KDM2BQ8NHM5 1336 aa7.77□□□□□ -1.17
SCFD1-212ENST00000554486 KIAA1551Q9HCM1 1747 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 HMMRO75330 724 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 ADH5P11766 374 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 POLD1P28340 1107 aa7.76□□□□□ -1.17
SCFD1-212ENST00000554486 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-212ENST00000554486 IFIT5Q13325 482 aaKnown RBP7.76□□□□□ -1.17
SCFD1-212ENST00000554486 CCDC57Q2TAC2 916 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms