RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 GNG11P61952 73 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 TIMM10P62072 90 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 EXOSC10Q01780 885 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 PDE4BQ07343 736 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MTF1Q14872 753 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ZSCAN26Q16670 478 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 LRRFIP1Q32MZ4 808 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 SPECC1Q5M775 1068 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 AXDND1Q5T1B0 1012 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 LRRC69Q6ZNQ3 347 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ANKS3Q6ZW76 656 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 FOXP4Q8IVH2 680 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 PDILTQ8N807 584 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC191Q8NCU4 936 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 DHX58Q96C10 678 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 NEUROD6Q96NK8 337 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 LLPHQ9BRT6 129 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 NT5C1AQ9BXI3 368 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 FANCLQ9NW38 375 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ARGLU1Q9NWB6 273 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 SNTG2Q9NY99 539 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ANKIB1Q9P2G1 1089 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 TLR6Q9Y2C9 796 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 PPP2R2CQ9Y2T4 447 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 DIP2BQ9P265 1576 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 TMEM2Q9UHN6 1383 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 UTYO14607 1347 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 EFCAB8A8MWE9 144 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 M0R2C6 588 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MARCH6O60337 910 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 FBXO24O75426 580 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 SSBP05455 408 aaKnown RBP eCLIP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 HOXB7P09629 217 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 BMP2P12643 396 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 BMP6P22004 513 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 CASQ1P31415 396 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 RFX5P48382 616 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 CEBPAP49715 358 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 TPM4P67936 248 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 PPP2R3AQ06190 1150 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 SLC20A2Q08357 652 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 POU4F2Q12837 409 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 GCKRQ14397 625 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC85BQ15834 202 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC158Q5M9N0 1113 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 COPS6Q7L5N1 327 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 UBE3BQ7Z3V4 1068 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 RNF217Q8TC41 542 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MICAL1Q8TDZ2 1067 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 XAGE3Q8WTP9 111 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 HNRNPLLQ8WVV9 542 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 C8orf76Q96K31 380 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 TCF12Q99081 682 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 HAUS7Q99871 368 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 BPIFA3Q9BQP9 254 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 TSEN34Q9BSV6 310 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 FUT8Q9BYC5 575 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 PLEKHA4Q9H4M7 779 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 RSPH14Q9UHP6 348 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 PUF60Q9UHX1 559 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ADAM21Q9UKJ8 722 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 TTF2Q9UNY4 1162 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MSRB2Q9Y3D2 182 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MRFAP1Q9Y605 127 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MED1Q15648 1581 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 LTN1O94822 1766 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 A0A1W2PQ27 194 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 A0A1W2PQ64 194 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 A0A1W2PQD8 194 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 MYO1CO00159 1063 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TOP1P11387 765 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TATP17735 454 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 GBP2P32456 591 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SYKP43405 635 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 NCAPD2Q15021 1401 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF827Q17R98 1081 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 LONRF2Q1L5Z9 754 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SKIDA1Q1XH10 827 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 LONRF3Q496Y0 759 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 AKAP4Q5JQC9 854 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ANO1Q5XXA6 986 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SHC4Q6S5L8 630 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 RSRC2Q7L4I2 434 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 VSTM4Q8IW00 320 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 GRAMD1CQ8IYS0 662 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 RPUSD2Q8IZ73 545 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TXLNBQ8N3L3 684 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 KBTBD3Q8NAB2 608 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PHC3Q8NDX5 983 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 KCNG4Q8TDN1 519 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 OSBP2Q969R2 916 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CHMP4CQ96CF2 233 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SHDQ96IW2 340 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 AGXT2Q9BYV1 514 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ZCCHC2Q9C0B9 1178 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 MRPL44Q9H9J2 332 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PDE11AQ9HCR9 933 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ARFGAP3Q9NP61 516 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 LZTFL1Q9NQ48 299 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 UBP1Q9NZI7 540 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms