RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SYN1P17600 705 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 RAB6AP20340 208 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 TAF1CQ15572 869 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-226ENST00000554350 KIF6Q6ZMV9 814 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 DYMQ7RTS9 669 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 PPP1R42Q7Z4L9 355 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 UBE2Q1Q7Z7E8 422 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 VSIG10LQ86VR7 867 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 GLYCTKQ8IVS8 523 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 CLMNQ96JQ2 1002 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 WDR18Q9BV38 432 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 ARHGAP39Q9C0H5 1083 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 CPNE3O75131 537 aaKnown RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 TFRCP02786 760 aaKnown RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 VIL1P09327 827 aaKnown RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 TAF1P21675 1872 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 MAGEA10P43363 369 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 ZNF280AP59817 542 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 ZNF765Q7L2R6 523 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 WFDC3Q8IUB2 231 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 RAET1EQ8TD07 263 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 U2AF1L4Q8WU68 220 aaKnown RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 EYA3Q99504 573 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 YIPF2Q9BWQ6 316 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 EHD4Q9H223 541 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 BSDC1Q9NW68 430 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 ZC3H7BQ9UGR2 993 aaKnown RBP7.48□□□□□ -1.21
ATXN3-226ENST00000554350 PPP1R9AQ9ULJ8 1098 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 UBN2Q6ZU65 1347 aa7.48□□□□□ -1.21
ATXN3-226ENST00000554350 WDHD1O75717 1129 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-226ENST00000554350 NTSR2O95665 410 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 SNRPA1P09661 255 aaKnown RBP7.47□□□□□ -1.21
ATXN3-226ENST00000554350 GRK4P32298 578 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 UBXN2AP68543 259 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 FAAP100Q0VG06 881 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 GRAPQ13588 217 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 MAP7Q14244 749 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 NBPF9Q3BBW0 867 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 LDLRAD1Q5T700 205 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 GRAPLQ8TC17 118 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-226ENST00000554350 CDX2Q99626 313 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-226ENST00000554350 PTPN18Q99952 460 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 CORO1BQ9BR76 489 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 POLR3GLQ9BT43 218 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 PAK6Q9NQU5 681 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-226ENST00000554350 SYNGAP1Q96PV0 1343 aa7.47□□□□□ -1.21
ATXN3-226ENST00000554350 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.21
ATXN3-226ENST00000554350 DUOX1Q9NRD9 1551 aa7.46□□□□□ -1.21
ATXN3-226ENST00000554350 CACNA1AO00555 2505 aa7.46□□□□□ -1.21
ATXN3-226ENST00000554350 IL13P35225 146 aa7.46□□□□□ -1.22
ATXN3-226ENST00000554350 ASPAP45381 313 aa7.46□□□□□ -1.22
ATXN3-226ENST00000554350 AGBL3Q8NEM8 1001 aa7.46□□□□□ -1.22
ATXN3-226ENST00000554350 CCDC74AQ96AQ1 378 aa7.46□□□□□ -1.22
ATXN3-226ENST00000554350 WDR89Q96FK6 387 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-226ENST00000554350 FBXL18Q96ME1 805 aa7.46□□□□□ -1.22
ATXN3-226ENST00000554350 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
ATXN3-226ENST00000554350 AP4E1Q9UPM8 1137 aa7.46□□□□□ -1.22
ATXN3-226ENST00000554350 SPTBN5Q9NRC6 3674 aaKnown RBP7.46□□□□□ -1.22
ATXN3-226ENST00000554350 MAP3K15Q6ZN16 1313 aa7.46□□□□□ -1.22
ATXN3-226ENST00000554350 DDX60Q8IY21 1712 aaKnown RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 GNAT3A8MTJ3 354 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 ERVV-1B6SEH8 477 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 EIF1AYO14602 144 aaKnown RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 NDUFB5O43674 189 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 SASH1O94885 1247 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 NEFLP07196 543 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 HCLS1P14317 486 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 FOSL2P15408 326 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 PRMT2P55345 433 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 GPSM2P81274 684 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 LACTBP83111 547 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 HP1BP3Q5SSJ5 553 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 FAM109BQ6ICB4 259 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 TMC4Q7Z404 712 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 IL17REQ8NFR9 667 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 MYLIPQ8WY64 445 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 PAWRQ96IZ0 340 aaKnown RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 UTP14AQ9BVJ6 771 aaKnown RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 CCDC86Q9H6F5 360 aaKnown RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 RAD18Q9NS91 495 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 POLLQ9UGP5 575 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 RIPOR2Q9Y4F9 1068 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 PCDHGC5Q9Y5F6 944 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 ZSWIM8A7E2V4 1837 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 ZNF646O15015 1829 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-226ENST00000554350 NUP98P52948 1817 aa7.45□□□□□ -1.22
ATXN3-226ENST00000554350 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 TMPRSS2O15393 492 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 SGPL1O95470 568 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 MYL6BP14649 208 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 ITGB5P18084 799 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 HOXD10P28358 340 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 GRM2Q14416 872 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 RPS26P11Q5JNZ5 115 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-226ENST00000554350 B4GALNT3Q6L9W6 998 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 TTLL7Q6ZT98 887 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 MORC1Q86VD1 984 aa7.44□□□□□ -1.22
ATXN3-226ENST00000554350 APOBEC3FQ8IUX4 373 aaKnown RBP7.44□□□□□ -1.22
ATXN3-226ENST00000554350 CITED4Q96RK1 184 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms