RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 MAFAQ8NHW3 353 aaPredicted RBP25.56■■□□□ 1.68
RCCD1-202ENST00000554302 TBC1D5Q92609 795 aa25.56■■□□□ 1.68
RCCD1-202ENST00000554302 WNT8AQ9H1J5 351 aa25.56■■□□□ 1.68
RCCD1-202ENST00000554302 A6NJR5 290 aa25.55■■□□□ 1.68
RCCD1-202ENST00000554302 B4DLN1 442 aa25.55■■□□□ 1.68
RCCD1-202ENST00000554302 MRPL12P52815 198 aaKnown RBP25.55■■□□□ 1.68
RCCD1-202ENST00000554302 GRIN2CQ14957 1233 aa25.55■■□□□ 1.68
RCCD1-202ENST00000554302 PPP2R5BQ15173 497 aa25.55■■□□□ 1.68
RCCD1-202ENST00000554302 MTG1Q9BT17 334 aaPredicted RBP25.55■■□□□ 1.68
RCCD1-202ENST00000554302 PBX4Q9BYU1 374 aa25.55■■□□□ 1.68
RCCD1-202ENST00000554302 JMJD4Q9H9V9 463 aa25.55■■□□□ 1.68
RCCD1-202ENST00000554302 PARP1P09874 1014 aaKnown RBP25.54■■□□□ 1.68
RCCD1-202ENST00000554302 QRICH1Q2TAL8 776 aa25.54■■□□□ 1.68
RCCD1-202ENST00000554302 TTC22Q5TAA0 569 aa25.54■■□□□ 1.68
RCCD1-202ENST00000554302 SYTL5Q8TDW5 730 aaPredicted RBP25.54■■□□□ 1.68
RCCD1-202ENST00000554302 TIFAQ96CG3 184 aa25.54■■□□□ 1.68
RCCD1-202ENST00000554302 VWCEQ96DN2 955 aa25.54■■□□□ 1.68
RCCD1-202ENST00000554302 ZNF576Q9H609 170 aa25.54■■□□□ 1.68
RCCD1-202ENST00000554302 COL20A1Q9P218 1284 aa25.54■■□□□ 1.68
RCCD1-202ENST00000554302 SCN10AQ9Y5Y9 1956 aa25.54■■□□□ 1.68
RCCD1-202ENST00000554302 GRXCR1A8MXD5 290 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 ARIH2O95376 493 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 FGBP02675 491 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 MYL3P08590 195 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 FOSL2P15408 326 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 CCL23P55773 120 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 SEC23AQ15436 765 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 CCDC62Q6P9F0 684 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 COPS5Q92905 334 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 TRMT13Q9NUP7 481 aaKnown RBP25.53■■□□□ 1.68
RCCD1-202ENST00000554302 CXXC1Q9P0U4 656 aaPredicted RBP25.53■■□□□ 1.68
RCCD1-202ENST00000554302 RAD50Q92878 1312 aa25.53■■□□□ 1.68
RCCD1-202ENST00000554302 SPTBN5Q9NRC6 3674 aaKnown RBP25.52■■□□□ 1.68
RCCD1-202ENST00000554302 KPNA6O60684 536 aa25.52■■□□□ 1.68
RCCD1-202ENST00000554302 SUPT20HL2P0C7V6 817 aa25.52■■□□□ 1.68
RCCD1-202ENST00000554302 TXNP10599 105 aaKnown RBP25.52■■□□□ 1.68
RCCD1-202ENST00000554302 PBX2P40425 430 aa25.52■■□□□ 1.68
RCCD1-202ENST00000554302 BRDTQ58F21 947 aaPredicted RBP25.52■■□□□ 1.68
RCCD1-202ENST00000554302 TAAR1Q96RJ0 339 aa25.52■■□□□ 1.68
RCCD1-202ENST00000554302 UBAC1Q9BSL1 405 aa25.52■■□□□ 1.68
RCCD1-202ENST00000554302 SUPT16HQ9Y5B9 1047 aaKnown RBP25.52■■□□□ 1.68
RCCD1-202ENST00000554302 TTLL4Q14679 1199 aa25.51■■□□□ 1.67
RCCD1-202ENST00000554302 IFIT1BQ5T764 474 aaKnown RBP25.51■■□□□ 1.67
RCCD1-202ENST00000554302 CYB5R4Q7L1T6 521 aa25.51■■□□□ 1.67
RCCD1-202ENST00000554302 FBXO11Q86XK2 927 aa25.51■■□□□ 1.67
RCCD1-202ENST00000554302 MCF2L2Q86YR7 1114 aa25.51■■□□□ 1.67
RCCD1-202ENST00000554302 STAG2Q8N3U4 1231 aa25.51■■□□□ 1.67
RCCD1-202ENST00000554302 NSUN6Q8TEA1 469 aaKnown RBP25.51■■□□□ 1.67
RCCD1-202ENST00000554302 MTMR8Q96EF0 704 aa25.51■■□□□ 1.67
RCCD1-202ENST00000554302 GPHNQ9NQX3 736 aaPredicted RBP25.51■■□□□ 1.67
RCCD1-202ENST00000554302 MRPL11Q9Y3B7 192 aaKnown RBP25.51■■□□□ 1.67
RCCD1-202ENST00000554302 GHRHRQ02643 423 aa25.5■■□□□ 1.67
RCCD1-202ENST00000554302 NBPF20Q3BBV1 942 aa25.5■■□□□ 1.67
RCCD1-202ENST00000554302 NFRKBQ6P4R8 1299 aa25.5■■□□□ 1.67
RCCD1-202ENST00000554302 IWS1Q96ST2 819 aa25.5■■□□□ 1.67
RCCD1-202ENST00000554302 COL25A1Q9BXS0 654 aaPredicted RBP25.5■■□□□ 1.67
RCCD1-202ENST00000554302 MTIF3Q9H2K0 278 aaKnown RBP25.5■■□□□ 1.67
RCCD1-202ENST00000554302 CHD7Q9P2D1 2997 aa25.5■■□□□ 1.67
RCCD1-202ENST00000554302 OPLAHO14841 1288 aa25.49■■□□□ 1.67
RCCD1-202ENST00000554302 CYP2C9P11712 490 aa25.49■■□□□ 1.67
RCCD1-202ENST00000554302 PTPN11Q06124 597 aaPredicted RBP25.49■■□□□ 1.67
RCCD1-202ENST00000554302 RPUSD2Q8IZ73 545 aaKnown RBP25.49■■□□□ 1.67
RCCD1-202ENST00000554302 RMDN3Q96TC7 470 aa25.49■■□□□ 1.67
RCCD1-202ENST00000554302 VAT1LQ9HCJ6 419 aa25.49■■□□□ 1.67
RCCD1-202ENST00000554302 MAD2L2Q9UI95 211 aa25.49■■□□□ 1.67
RCCD1-202ENST00000554302 MYH6P13533 1939 aa25.48■■□□□ 1.67
RCCD1-202ENST00000554302 OTOP2Q7RTS6 562 aa25.48■■□□□ 1.67
RCCD1-202ENST00000554302 SCLYQ96I15 445 aa25.48■■□□□ 1.67
RCCD1-202ENST00000554302 PALM3A6NDB9 673 aaPredicted RBP25.47■■□□□ 1.67
RCCD1-202ENST00000554302 CYP21A2P08686 494 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 CHMLP26374 656 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 HSD17B4P51659 736 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 ARHGAP1Q07960 439 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 RAB30Q15771 203 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 STXBP2Q15833 593 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 AMNQ9BXJ7 453 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 KIAA1217Q5T5P2 1943 aa25.47■■□□□ 1.67
RCCD1-202ENST00000554302 KLRF2D3W0D1 207 aa25.46■■□□□ 1.67
RCCD1-202ENST00000554302 DHX16O60231 1041 aaKnown RBP25.46■■□□□ 1.67
RCCD1-202ENST00000554302 PPP1R11O60927 126 aaPredicted RBP25.46■■□□□ 1.67
RCCD1-202ENST00000554302 PFKMP08237 780 aa25.46■■□□□ 1.67
RCCD1-202ENST00000554302 PTH1RQ03431 593 aa25.46■■□□□ 1.67
RCCD1-202ENST00000554302 RUFY2Q8WXA3 655 aa25.46■■□□□ 1.67
RCCD1-202ENST00000554302 ZBTB5O15062 677 aa25.45■■□□□ 1.66
RCCD1-202ENST00000554302 LY6KQ17RY6 165 aa25.45■■□□□ 1.66
RCCD1-202ENST00000554302 SLC35G1Q2M3R5 365 aa25.45■■□□□ 1.66
RCCD1-202ENST00000554302 SEPT14Q6ZU15 432 aa25.45■■□□□ 1.66
RCCD1-202ENST00000554302 AFG1LQ8WV93 481 aa25.45■■□□□ 1.66
RCCD1-202ENST00000554302 PXMP2Q9NR77 195 aa25.45■■□□□ 1.66
RCCD1-202ENST00000554302 MAP3K20Q9NYL2 800 aaKnown RBP25.45■■□□□ 1.66
RCCD1-202ENST00000554302 PITPNM1O00562 1244 aa25.44■■□□□ 1.66
RCCD1-202ENST00000554302 EIF3JO75822 258 aaKnown RBP25.44■■□□□ 1.66
RCCD1-202ENST00000554302 GH1P01241 217 aa25.44■■□□□ 1.66
RCCD1-202ENST00000554302 MMP3P08254 477 aa25.44■■□□□ 1.66
RCCD1-202ENST00000554302 TRDNQ13061 729 aa25.44■■□□□ 1.66
RCCD1-202ENST00000554302 FAM47CQ5HY64 1035 aa25.44■■□□□ 1.66
RCCD1-202ENST00000554302 ARHGEF16Q5VV41 709 aa25.44■■□□□ 1.66
RCCD1-202ENST00000554302 EMID1Q96A84 441 aaPredicted RBP25.44■■□□□ 1.66
RCCD1-202ENST00000554302 MSRAQ9UJ68 235 aa25.44■■□□□ 1.66
RCCD1-202ENST00000554302 DDX41Q9UJV9 622 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms