RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 SNHG28P0DPA3 235 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 PDHBP11177 359 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 MX1P20591 662 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
TUBB3-204ENST00000554116 PWP2Q15269 919 aaKnown RBP13.63□□□□□ -0.23
TUBB3-204ENST00000554116 CCDC96Q2M329 555 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 TBC1D5Q92609 795 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 MTG1Q9BT17 334 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-204ENST00000554116 CPVLQ9H3G5 476 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 COL4A4P53420 1690 aaPredicted RBP13.63□□□□□ -0.23
TUBB3-204ENST00000554116 KIAA1217Q5T5P2 1943 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 A0A0D9SFI3 127 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
TUBB3-204ENST00000554116 LRRFIP1Q32MZ4 808 aaKnown RBP13.62□□□□□ -0.23
TUBB3-204ENST00000554116 TMEM67Q5HYA8 995 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 CCDC62Q6P9F0 684 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 ZNF589Q86UQ0 364 aaPredicted RBP13.62□□□□□ -0.23
TUBB3-204ENST00000554116 MICALL1Q8N3F8 863 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 OR6J1Q8NGC5 347 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
TUBB3-204ENST00000554116 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
TUBB3-204ENST00000554116 ADD3Q9UEY8 706 aaKnown RBP13.62□□□□□ -0.23
TUBB3-204ENST00000554116 LCHNA4D1U4 455 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 TLL1O43897 1013 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 PFKMP08237 780 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 SUPT20HL2P0C7V6 817 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 CALML3P27482 149 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 CPT1AP50416 773 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 SKIV2LQ15477 1246 aaKnown RBP13.61□□□□□ -0.23
TUBB3-204ENST00000554116 NFRKBQ6P4R8 1299 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 RNF207Q6ZRF8 634 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 TMCO2Q7Z6W1 182 aaPredicted RBP13.61□□□□□ -0.23
TUBB3-204ENST00000554116 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
TUBB3-204ENST00000554116 KAT2BQ92831 832 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 RWDD1Q9H446 243 aaPredicted RBP13.61□□□□□ -0.23
TUBB3-204ENST00000554116 COL20A1Q9P218 1284 aa13.61□□□□□ -0.23
TUBB3-204ENST00000554116 GTPBP6O43824 516 aaPredicted RBP13.6□□□□□ -0.23
TUBB3-204ENST00000554116 HSPD1P10809 573 aaKnown RBP13.6□□□□□ -0.23
TUBB3-204ENST00000554116 TMEM31Q5JXX7 168 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 TBC1D10CQ8IV04 446 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 LRFN3Q9BTN0 628 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 EPHX3Q9H6B9 360 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 COG5Q9UP83 839 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 WDR19Q8NEZ3 1342 aa13.6□□□□□ -0.23
TUBB3-204ENST00000554116 MUC6Q6W4X9 2439 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 NKRFO15226 690 aaKnown RBP eCLIP13.59□□□□□ -0.235e-7■□□□□ 10.7
TUBB3-204ENST00000554116 TXNP10599 105 aaKnown RBP13.59□□□□□ -0.23
TUBB3-204ENST00000554116 RFC2P35250 354 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 PDE1AP54750 535 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 HAND2P61296 217 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 PTPN11Q06124 597 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-204ENST00000554116 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 GRB10Q13322 594 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 PPP2R5BQ15173 497 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 FAM47CQ5HY64 1035 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 RRP12Q5JTH9 1297 aaKnown RBP13.59□□□□□ -0.23
TUBB3-204ENST00000554116 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-204ENST00000554116 TRAF7Q6Q0C0 670 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 DNERQ8NFT8 737 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 SCFD2Q8WU76 684 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 TAAR1Q96RJ0 339 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 SLC9A7Q96T83 725 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 HELLSQ9NRZ9 838 aa13.59□□□□□ -0.23
TUBB3-204ENST00000554116 IGHDP01880 384 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 GOLGA8HP0CJ92 632 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 PDE4DQ08499 809 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 HIC1Q14526 733 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 LY6KQ17RY6 165 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 AFG1LQ8WV93 481 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 ARNTL2Q8WYA1 636 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 WNT8BQ93098 351 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 UBA5Q9GZZ9 404 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 C11orf16Q9NQ32 467 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 MYH6P13533 1939 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
TUBB3-204ENST00000554116 KPNA6O60684 536 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 NBNO60934 754 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 WDR5P61964 334 aaKnown RBP13.57□□□□□ -0.24
TUBB3-204ENST00000554116 DEFB103AP81534 67 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 RBL2Q08999 1139 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 NMIQ13287 307 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-204ENST00000554116 MBTPS1Q14703 1052 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 MCMDC2Q4G0Z9 681 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 SESTD1Q86VW0 696 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 TTC14Q96N46 770 aa13.57□□□□□ -0.24
TUBB3-204ENST00000554116 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-204ENST00000554116 TOMM22Q9NS69 142 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms