RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TSPYL5Q86VY4 417 aaPredicted RBP4.51□□□□□ -1.69
SLIRP-202ENST00000553981 DNAJC5GQ8N7S2 189 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 PDZD8Q8NEN9 1154 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 ZNF526Q8TF50 670 aaPredicted RBP4.51□□□□□ -1.69
SLIRP-202ENST00000553981 GPR62Q9BZJ7 368 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 RNF19AQ9NV58 838 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 DUSP13Q9UII6 198 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 ADAM30Q9UKF2 790 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 AK5Q9Y6K8 562 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 C4BP0C0L5 1744 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 UPK3BL1B0FP48 263 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 B8ZZF3 427 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 UPK3BL2E5RIL1 263 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 NUAK1O60285 661 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 PRPF40AO75400 957 aaKnown RBP4.5□□□□□ -1.69
SLIRP-202ENST00000553981 ITPK1Q13572 414 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 TIGD5Q53EQ6 642 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 MEI1Q5TIA1 1274 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 LILRA2Q8N149 483 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 DTWD2Q8NBA8 298 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 LINC00116Q8NCU8 138 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 JARID2Q92833 1246 aaPredicted RBP4.5□□□□□ -1.69
SLIRP-202ENST00000553981 GPATCH2Q9NW75 528 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 TFCP2L1Q9NZI6 479 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 CCNL1Q9UK58 526 aaPredicted RBP4.5□□□□□ -1.69
SLIRP-202ENST00000553981 TLR6Q9Y2C9 796 aa4.5□□□□□ -1.69
SLIRP-202ENST00000553981 ROCK2O75116 1388 aaKnown RBP4.5□□□□□ -1.69
SLIRP-202ENST00000553981 N4BP2Q86UW6 1770 aaPredicted RBP4.5□□□□□ -1.69
SLIRP-202ENST00000553981 EDC4Q6P2E9 1401 aaKnown RBP4.49□□□□□ -1.69
SLIRP-202ENST00000553981 FYB1O15117 783 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 HSPA6P17066 643 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 PRELPP51888 382 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 HSP90AB2PQ58FF8 381 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 IRF2BP1Q8IU81 584 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 ZCRB1Q8TBF4 217 aaKnown RBP4.49□□□□□ -1.69
SLIRP-202ENST00000553981 CYB5D2Q8WUJ1 264 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 SYTL4Q96C24 671 aaPredicted RBP4.49□□□□□ -1.69
SLIRP-202ENST00000553981 MCOLN1Q9GZU1 580 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 KCNH3Q9ULD8 1083 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 PCDHA11Q9Y5I1 949 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 CORINQ9Y5Q5 1042 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 CICQ96RK0 1608 aaPredicted RBP4.49□□□□□ -1.69
SLIRP-202ENST00000553981 KIF13BQ9NQT8 1826 aa4.49□□□□□ -1.69
SLIRP-202ENST00000553981 IGSF1Q8N6C5 1336 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 NCAPD2Q15021 1401 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 BRCA1P38398 1863 aaKnown RBP4.48□□□□□ -1.69
SLIRP-202ENST00000553981 MYH14Q7Z406 1995 aaKnown RBP4.48□□□□□ -1.69
SLIRP-202ENST00000553981 MYOCOSA0A1B0GUC4 107 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 FITM1A5D6W6 292 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 LRRN2O75325 713 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 KCNA3P22001 575 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 KCNA1Q09470 495 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 NR0B2Q15466 257 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 ZNF605Q86T29 641 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 OXR1Q8N573 874 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 FAM13CQ8NE31 585 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 PIGBQ92521 554 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 DUSP9Q99956 384 aaKnown RBP4.48□□□□□ -1.69
SLIRP-202ENST00000553981 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 IRF2BPLQ9H1B7 796 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 SLC6A17Q9H1V8 727 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 PALLDQ8WX93 1383 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 PXDNLA1KZ92 1463 aa4.48□□□□□ -1.69
SLIRP-202ENST00000553981 PKD1L3Q7Z443 1732 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 ST20-MTHFSA0A0A6YYL1 179 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 PLCG1P19174 1290 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 POLD1P28340 1107 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 BUD31P41223 144 aaPredicted RBP4.47□□□□□ -1.69
SLIRP-202ENST00000553981 DLG4P78352 724 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 TMEM201Q5SNT2 666 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 PHC3Q8NDX5 983 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 RNF141Q8WVD5 230 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 DHX38Q92620 1227 aaKnown RBP4.47□□□□□ -1.69
SLIRP-202ENST00000553981 INTS4Q96HW7 963 aaKnown RBP4.47□□□□□ -1.69
SLIRP-202ENST00000553981 C20orf173Q96LM9 149 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 CWC22Q9HCG8 908 aaKnown RBP4.47□□□□□ -1.69
SLIRP-202ENST00000553981 NMRK2Q9NPI5 230 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 EBF1Q9UH73 591 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 ASAP1Q9ULH1 1129 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 YBX2Q9Y2T7 364 aaKnown RBP4.47□□□□□ -1.69
SLIRP-202ENST00000553981 CD2APQ9Y5K6 639 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 ADAMTS7Q9UKP4 1686 aa4.47□□□□□ -1.69
SLIRP-202ENST00000553981 NSD3Q9BZ95 1437 aa4.46□□□□□ -1.69
SLIRP-202ENST00000553981 GOLGB1Q14789 3259 aaKnown RBP4.46□□□□□ -1.7
SLIRP-202ENST00000553981 USP47Q96K76 1375 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 A0A0G2JLW4 131 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 SHISA3A0PJX4 238 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 GRIN3BO60391 1043 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 PEX10O60683 326 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 SEMA7AO75326 666 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 RLBP1P12271 317 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 HOXA5P20719 270 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 YARSP54577 528 aaKnown RBP4.46□□□□□ -1.7
SLIRP-202ENST00000553981 CTSWP56202 376 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 BNC2Q6ZN30 1099 aaPredicted RBP4.46□□□□□ -1.7
SLIRP-202ENST00000553981 SLFN12Q8IYM2 578 aa4.46□□□□□ -1.7
SLIRP-202ENST00000553981 BAHD1Q8TBE0 780 aaPredicted RBP4.46□□□□□ -1.7
SLIRP-202ENST00000553981 NOC4LQ9BVI4 516 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms