RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 C9orf131Q5VYM1 1079 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 ERICH6Q7L0X2 663 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 CPNE8Q86YQ8 564 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 KIAA0825Q8IV33 1275 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 FAM26EQ8N5C1 309 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 TXNDC5Q8NBS9 432 aaKnown RBP4.37□□□□□ -1.71
SRP54-204ENST00000553923 PLEKHO2Q8TD55 490 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 SH3RF3Q8TEJ3 882 aaPredicted RBP4.37□□□□□ -1.71
SRP54-204ENST00000553923 SPON2Q9BUD6 331 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 MENTQ9BUN1 341 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 MRIQ9BWK5 157 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 KLHL25Q9H0H3 589 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 FAM86C1Q9NVL1 165 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.37□□□□□ -1.71
SRP54-204ENST00000553923 PPP4R1LQ9P1A2 415 aa4.37□□□□□ -1.71
SRP54-204ENST00000553923 C7orf72A4D263 438 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 SGSM2O43147 1006 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 B4GALT3O60512 393 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 NTRK1P04629 796 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 ICAM4Q14773 271 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 TCEAL1Q15170 157 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 CHST13Q8NET6 341 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 DNERQ8NFT8 737 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 ZNF747Q9BV97 191 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 PCDH18Q9HCL0 1135 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 WHRNQ9P202 907 aa4.36□□□□□ -1.71
SRP54-204ENST00000553923 C2orf71A6NGG8 1288 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 STXBP3O00186 592 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 ERCC3P19447 782 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 GDF5P43026 501 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 ITGA1P56199 1179 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 MCTP2Q6DN12 878 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 ETV3LQ6ZN32 361 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 ARHGEF39Q8N4T4 335 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 ZNF513Q8N8E2 541 aaPredicted RBP4.35□□□□□ -1.71
SRP54-204ENST00000553923 DPF3Q92784 378 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 MBD6Q96DN6 1003 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 HAUS7Q99871 368 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 BACE2Q9Y5Z0 518 aa4.35□□□□□ -1.71
SRP54-204ENST00000553923 DDX3XO00571 662 aaKnown RBP eCLIP4.34□□□□□ -1.71
SRP54-204ENST00000553923 GPR42O15529 346 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 FUCA1P04066 466 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 PAMP19021 973 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 DPY19L1Q2PZI1 675 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 MBLAC2Q68D91 279 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 BORAQ6PGQ7 559 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 GLB1LQ6UWU2 654 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 STK32CQ86UX6 486 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 ZFPM1Q8IX07 1006 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 TTLL6Q8N841 843 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 ADCY4Q8NFM4 1077 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 PCED1AQ9H1Q7 454 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 SLITRK6Q9H5Y7 841 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 PPT2Q9UMR5 302 aa4.34□□□□□ -1.71
SRP54-204ENST00000553923 ZNF536O15090 1300 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 C9orf118A6NHY6 69 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 LAMTOR5O43504 91 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 ZNF28P17035 718 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 SEPHS1P49903 392 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 GRB10Q13322 594 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 R3HDM1Q15032 1099 aaKnown RBP4.33□□□□□ -1.72
SRP54-204ENST00000553923 COPS5Q92905 334 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 RCC1LQ96I51 464 aaKnown RBP4.33□□□□□ -1.72
SRP54-204ENST00000553923 WWC2-AS2Q96NR7 200 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 FERD3LQ96RJ6 166 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 MMP19Q99542 508 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 KLC2Q9H0B6 622 aa4.33□□□□□ -1.72
SRP54-204ENST00000553923 CGGBP1Q9UFW8 167 aaPredicted RBP4.33□□□□□ -1.72
SRP54-204ENST00000553923 TRBV23OR9-2A0A075B6M9 112 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 NPHP3-ACAD11A0A0J9YXS1 232 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 NPHS1O60500 1241 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 ADAM9Q13443 819 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 SURF1Q15526 300 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 CR1LQ2VPA4 569 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 PKN3Q6P5Z2 889 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 CD300LDQ6UXZ3 194 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 FAM124AQ86V42 546 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 DCP2Q8IU60 420 aaKnown RBP4.32□□□□□ -1.72
SRP54-204ENST00000553923 USP33Q8TEY7 942 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 KLHL6Q8WZ60 621 aa4.32□□□□□ -1.72
SRP54-204ENST00000553923 LCORQ96JN0 433 aaPredicted RBP4.32□□□□□ -1.72
SRP54-204ENST00000553923 FZD7O75084 574 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 AMHP03971 560 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 EPHX1P07099 455 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 EPHB4P54760 987 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 AMPD2Q01433 879 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 HEATR6Q6AI08 1181 aaKnown RBP4.31□□□□□ -1.72
SRP54-204ENST00000553923 FAM126BQ8IXS8 530 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 KISS1RQ969F8 398 aaPredicted RBP4.31□□□□□ -1.72
SRP54-204ENST00000553923 RNF34Q969K3 372 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 FGD4Q96M96 766 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 VPS11Q9H270 941 aa4.31□□□□□ -1.72
SRP54-204ENST00000553923 PATE3B3GLJ2 98 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 SLC6A11P48066 632 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 CYP4F3Q08477 520 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 INF2Q27J81 1249 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 GNPTABQ3T906 1256 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 CRB2Q5IJ48 1285 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 SEC14L1Q92503 715 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 YTHDC1Q96MU7 727 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms