RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ADCY7P51828 1080 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 ATP2B2Q01814 1243 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 LARP4BQ92615 738 aaKnown RBP16.24■□□□□ 0.19
ACTN1-211ENST00000553882 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 MTMR9Q96QG7 549 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 MMS19Q96T76 1030 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 SAR1BQ9Y6B6 198 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 EDIL3O43854 480 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 SERPINB2P05120 415 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 FKBP15Q5T1M5 1219 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 HDXQ7Z353 690 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 CERS3Q8IU89 383 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 NUP58Q9BVL2 599 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 L1RE1Q9UN81 338 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 LRRC41Q15345 812 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
ACTN1-211ENST00000553882 LTBP4Q8N2S1 1624 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 ZNF185O15231 689 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 SLC16A2P36021 539 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 TMEM266Q2M3C6 531 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 CENPPQ6IPU0 288 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-211ENST00000553882 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
ACTN1-211ENST00000553882 MXD3Q9BW11 206 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 DDX4Q9NQI0 724 aaKnown RBP16.22■□□□□ 0.19
ACTN1-211ENST00000553882 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 GAKO14976 1311 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 ZNF263O14978 683 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 RAD21O60216 631 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 TOM1O60784 492 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 GYS1P13807 737 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 SEMA3FQ13275 785 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 TTBK2Q6IQ55 1244 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 C2CD5Q86YS7 1000 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-211ENST00000553882 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 RETREG2Q8NC44 543 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 CCDC42Q96M95 316 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 MMRN2Q9H8L6 949 aa16.22■□□□□ 0.19
ACTN1-211ENST00000553882 ESYT2A0FGR8 921 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 ZMYND10O75800 440 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 ERGIC2Q96RQ1 377 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 NDST4Q9H3R1 872 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 VPS18Q9P253 973 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 ADAM21Q9UKJ8 722 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-211ENST00000553882 PHACTR2O75167 634 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 FAM193AP78312 1265 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 CASP8Q14790 479 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 UNC13DQ70J99 1090 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 CCDC155Q8N6L0 562 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 DDX12PQ92771 950 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 FAM163AQ96GL9 167 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-211ENST00000553882 DRC1Q96MC2 740 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 HINFPQ9BQA5 517 aa16.21■□□□□ 0.19
ACTN1-211ENST00000553882 EIF3CLB5ME19 914 aaKnown RBP16.2■□□□□ 0.18
ACTN1-211ENST00000553882 SMARCA1P28370 1054 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.187e-6■■□□□ 13.4
ACTN1-211ENST00000553882 SCNN1DP51172 638 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 ECM1Q16610 540 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 VWA3BQ502W6 1294 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 ADGRF4Q8IZF3 695 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 TBC1D22AQ8WUA7 517 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 GDAP1L1Q96MZ0 367 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 EIF3CQ99613 913 aaKnown RBP16.2■□□□□ 0.18
ACTN1-211ENST00000553882 MPHOSPH10O00566 681 aaKnown RBP16.2■□□□□ 0.18
ACTN1-211ENST00000553882 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
ACTN1-211ENST00000553882 NOVP48745 357 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 TUBB4BP68371 445 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 KIF5AQ12840 1032 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 ASPRV1Q53RT3 343 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 CCDC170Q8IYT3 715 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 CAGE1Q8TC20 777 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 JMJD4Q9H9V9 463 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 STK17AQ9UEE5 414 aa16.2■□□□□ 0.18
ACTN1-211ENST00000553882 MARCH6O60337 910 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 SPA17Q15506 151 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 PAPD7Q5XG87 772 aaKnown RBP16.19■□□□□ 0.18
ACTN1-211ENST00000553882 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-211ENST00000553882 EHBP1Q8NDI1 1231 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 RAD54LQ92698 747 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 CCDC102AQ96A19 550 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 RAB34Q9BZG1 259 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 LRRIQ3A6PVS8 624 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-211ENST00000553882 PPP1R2P41236 205 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 LMAN1P49257 510 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 HNRNPH2P55795 449 aaKnown RBP16.19■□□□□ 0.18
ACTN1-211ENST00000553882 GABPAQ06546 454 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 GPS2Q13227 327 aa16.19■□□□□ 0.18
ACTN1-211ENST00000553882 IFIH1Q9BYX4 1025 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms