RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 EIF1ADQ8N9N8 165 aaKnown RBP5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 MIGA1Q8NAN2 632 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 NOA1Q8NC60 698 aaKnown RBP5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 C1orf131Q8NDD1 294 aaKnown RBP5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 TRIM58Q8NG06 486 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 C7orf25Q9BPX7 421 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 SPZ1Q9BXG8 430 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 EPC1Q9H2F5 836 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 EXOC1Q9NV70 894 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 TAB2Q9NYJ8 693 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 VPS18Q9P253 973 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 SLAIN2Q9P270 581 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 RNF14Q9UBS8 474 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 STK17AQ9UEE5 414 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 FAM184BQ9ULE4 1060 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 HPCAL4Q9UM19 191 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 THRAP3Q9Y2W1 955 aaKnown RBP5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 JRKLQ9Y4A0 524 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 FLT1P17948 1338 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 NHSQ6T4R5 1651 aa5.87□□□□□ -1.47
TMEM55B-204ENST00000553602 MYH1P12882 1939 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 CCDC88AQ3V6T2 1871 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 NAV1Q8NEY1 1877 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 COL4A1P02462 1669 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 PLIN4Q96Q06 1357 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 PVALEFA0A1B0GWK0 134 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 MOXD2PA6NHM9 499 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 SRRM3A6NNA2 597 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 NUTM2BA6NNL0 878 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 LRRIQ3A6PVS8 624 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 MINDY4BA8MYZ0 360 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 NUTM2EB1AL46 878 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 PJA2O43164 708 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 ZEB2O60315 1214 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 RNF40O75150 1001 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 FGFR1OPO95684 399 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 MAGEA9P43362 315 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 CRKLP46109 303 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 USP46P62068 366 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 AMPD3Q01432 767 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 LRRC63Q05C16 580 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 PTPN21Q16825 1174 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 GLE1Q53GS7 698 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 CCDC122Q5T0U0 273 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 EMC10Q5UCC4 262 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 EMBQ6PCB8 327 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 CCDC84Q86UT8 332 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 SMYD4Q8IYR2 804 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 HELBQ8NG08 1087 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 AFAP1L1Q8TED9 768 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 AENQ8WTP8 325 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 SDR42E1Q8WUS8 393 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 CPLX3Q8WVH0 158 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 SYN2Q92777 582 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 P2RX5Q93086 422 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 CAVIN3Q969G5 261 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 JAKMIP2Q96AA8 810 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 NSUN4Q96CB9 384 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 POM121Q96HA1 1249 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 TRIM47Q96LD4 638 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 DUSP9Q99956 384 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 SLF1Q9BQI6 1058 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 TUBGCP2Q9BSJ2 902 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 NUCKS1Q9H1E3 243 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 VPS16Q9H269 839 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 ZCCHC17Q9NP64 241 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 DCP1AQ9NPI6 582 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 BARHL2Q9NY43 387 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 SNX12Q9UMY4 172 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 PLAGL2Q9UPG8 496 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 FAN1Q9Y2M0 1017 aa5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 RRP15Q9Y3B9 282 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 BAZ2AQ9UIF9 1905 aaKnown RBP5.86□□□□□ -1.47
TMEM55B-204ENST00000553602 FAM205AQ6ZU69 1335 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CNTNAP4Q9C0A0 1308 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 IRS2Q9Y4H2 1338 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 A0A0U1RQJ8 604 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CCDC194A0A1B0GVG4 234 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SSU72P8A0A1W2PR75 194 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 USP17L12C9JPN9 530 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 USP17L21D6R901 530 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 GOLGA8KD6RF30 607 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 RBAK-RBAKDNI3L0D1 243 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 RNF225M0QZC1 329 aaPredicted RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 STXBP3O00186 592 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SMAPO00193 183 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CES2O00748 559 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SOCS7O14512 581 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 USO1O60763 962 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 TACC1O75410 805 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 PRDM1O75626 825 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ATP1A1P05023 1023 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 OR52Z1P0C646 297 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 RHOXF2BP0C7M4 288 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 TRIM21P19474 475 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ATP2B1P20020 1258 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 MCM7P33993 719 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 UBA7P41226 1012 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms