RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CCDC82Q8N4S0 544 aa21.29■■□□□ 1
CPSF2-202ENST00000553427 SYNRGQ9UMZ2 1314 aa21.29■■□□□ 1
CPSF2-202ENST00000553427 KBTBD13C9JR72 458 aa21.28■■□□□ 1
CPSF2-202ENST00000553427 TNFAIP2Q03169 654 aa21.28■■□□□ 1
CPSF2-202ENST00000553427 LENG1Q96BZ8 264 aaPredicted RBP21.28■■□□□ 1
CPSF2-202ENST00000553427 GNEQ9Y223 722 aaKnown RBP21.28■■□□□ 1
CPSF2-202ENST00000553427 Q9Y3F1 56 aa21.28■■□□□ 1
CPSF2-202ENST00000553427 hCG_1642624A0A1W2PR95 340 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 IFNAR1P17181 557 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 HOXA13P31271 388 aaPredicted RBP21.27■■□□□ 1
CPSF2-202ENST00000553427 ADCYAP1R1P41586 468 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 GJA9P57773 515 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 ANKRD1Q15327 319 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 NTRK3Q16288 839 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 ARHGEF16Q5VV41 709 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 HEATR3Q7Z4Q2 680 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 KLHDC9Q8NEP7 349 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 PDCD2LQ9BRP1 358 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 TSEN34Q9BSV6 310 aaKnown RBP21.27■■□□□ 1
CPSF2-202ENST00000553427 SPC25Q9HBM1 224 aa21.27■■□□□ 1
CPSF2-202ENST00000553427 V9GY48 417 aaPredicted RBP21.27■■□□□ 1
CPSF2-202ENST00000553427 MEIS2O14770 477 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 PGK1P00558 417 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 STXBP2Q15833 593 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 DUSP28Q4G0W2 176 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 GJC2Q5T442 439 aaPredicted RBP21.26■□□□□ 0.99
CPSF2-202ENST00000553427 WWC2Q6AWC2 1192 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 EEPD1Q7L9B9 569 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 SCFD2Q8WU76 684 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 CUL5Q93034 780 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 PDGFCQ9NRA1 345 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 BARHL2Q9NY43 387 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 PHF24Q9UPV7 400 aa21.26■□□□□ 0.99
CPSF2-202ENST00000553427 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 PRPF3O43395 683 aaKnown RBP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 EIF3JO75822 258 aaKnown RBP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 NR3C2P08235 984 aa21.25■□□□□ 0.99
CPSF2-202ENST00000553427 SMPD1P17405 629 aa21.25■□□□□ 0.99
CPSF2-202ENST00000553427 EIF2AK2P19525 551 aaKnown RBP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 PFKFB3Q16875 520 aaPredicted RBP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 CCSAPQ6IQ19 270 aaPredicted RBP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 GPKOWQ92917 476 aaPredicted RBP eCLIP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 RNF26Q9BY78 433 aaPredicted RBP21.25■□□□□ 0.99
CPSF2-202ENST00000553427 PSTPIP2Q9H939 334 aa21.25■□□□□ 0.99
CPSF2-202ENST00000553427 STXBP3O00186 592 aa21.24■□□□□ 0.99
CPSF2-202ENST00000553427 NKRFO15226 690 aaKnown RBP eCLIP21.24■□□□□ 0.99
CPSF2-202ENST00000553427 SCG2P13521 617 aa21.24■□□□□ 0.99
CPSF2-202ENST00000553427 TLK2Q86UE8 772 aa21.24■□□□□ 0.99
CPSF2-202ENST00000553427 VSIG10LQ86VR7 867 aa21.24■□□□□ 0.99
CPSF2-202ENST00000553427 WDR11Q9BZH6 1224 aa21.24■□□□□ 0.99
CPSF2-202ENST00000553427 GLT8D2Q9H1C3 349 aa21.24■□□□□ 0.99
CPSF2-202ENST00000553427 MOXD2PA6NHM9 499 aa21.23■□□□□ 0.99
CPSF2-202ENST00000553427 CTAGE5O15320 804 aa21.23■□□□□ 0.99
CPSF2-202ENST00000553427 RBM25P49756 843 aaKnown RBP21.23■□□□□ 0.99
CPSF2-202ENST00000553427 NAPAP54920 295 aa21.23■□□□□ 0.99
CPSF2-202ENST00000553427 PGM5Q15124 567 aa21.23■□□□□ 0.99
CPSF2-202ENST00000553427 TYW1BQ6NUM6 668 aa21.23■□□□□ 0.99
CPSF2-202ENST00000553427 FCHSD1Q86WN1 690 aa21.23■□□□□ 0.99
CPSF2-202ENST00000553427 SMARCC2Q8TAQ2 1214 aa21.23■□□□□ 0.99
CPSF2-202ENST00000553427 NCOA5Q9HCD5 579 aaKnown RBP21.23■□□□□ 0.99
CPSF2-202ENST00000553427 ESYT2A0FGR8 921 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 STAM2O75886 525 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 C6orf222P0C671 652 aaPredicted RBP21.22■□□□□ 0.99
CPSF2-202ENST00000553427 CCND2P30279 289 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 AK2P54819 239 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 CCT2P78371 535 aaKnown RBP21.22■□□□□ 0.99
CPSF2-202ENST00000553427 TTLL4Q14679 1199 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 SNX17Q15036 470 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 XRRA1Q6P2D8 792 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 CCDC62Q6P9F0 684 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 USP17L6PQ6QN14 398 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 NOL8Q76FK4 1167 aaKnown RBP21.22■□□□□ 0.99
CPSF2-202ENST00000553427 PCSK9Q8NBP7 692 aaKnown RBP21.22■□□□□ 0.99
CPSF2-202ENST00000553427 IL31RAQ8NI17 732 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 SENP6Q9GZR1 1112 aaPredicted RBP21.22■□□□□ 0.99
CPSF2-202ENST00000553427 AP5M1Q9H0R1 490 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 RIC8AQ9NPQ8 531 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 GTF3C3Q9Y5Q9 886 aa21.22■□□□□ 0.99
CPSF2-202ENST00000553427 MYADML2A6NDP7 307 aa21.21■□□□□ 0.99
CPSF2-202ENST00000553427 PFKFB2O60825 505 aa21.21■□□□□ 0.99
CPSF2-202ENST00000553427 AKAP17AQ02040 695 aaKnown RBP21.21■□□□□ 0.99
CPSF2-202ENST00000553427 PKN1Q16512 942 aa21.21■□□□□ 0.99
CPSF2-202ENST00000553427 PRPF38BQ5VTL8 546 aaKnown RBP21.21■□□□□ 0.99
CPSF2-202ENST00000553427 C1orf53Q5VUE5 145 aa21.21■□□□□ 0.99
CPSF2-202ENST00000553427 CPLX2Q6PUV4 134 aaKnown RBP21.21■□□□□ 0.99
CPSF2-202ENST00000553427 PHKBQ93100 1093 aa21.21■□□□□ 0.99
CPSF2-202ENST00000553427 C22orf23Q9BZE7 217 aa21.21■□□□□ 0.99
CPSF2-202ENST00000553427 TPCN1Q9ULQ1 816 aa21.21■□□□□ 0.99
CPSF2-202ENST00000553427 DNAH12Q6ZR08 3092 aa21.2■□□□□ 0.99
CPSF2-202ENST00000553427 ALPK3Q96L96 1907 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 A0A1W2PQ45 241 aaPredicted RBP21.2■□□□□ 0.98
CPSF2-202ENST00000553427 A0A1W2PQY0 241 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 CPLX1O14810 134 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 MYCNP04198 464 aaPredicted RBP21.2■□□□□ 0.98
CPSF2-202ENST00000553427 ADCY7P51828 1080 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 NEK4P51957 841 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 ACLYP53396 1101 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 KCNA10Q16322 511 aa21.2■□□□□ 0.98
CPSF2-202ENST00000553427 FSCN1Q16658 493 aaKnown RBP21.2■□□□□ 0.98
CPSF2-202ENST00000553427 GNASQ5JWF2 1037 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms