RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 OXER1Q8TDS5 423 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 TINF2Q9BSI4 451 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 C6orf50Q9HD87 102 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 PXMP2Q9NR77 195 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 TMEM260Q9NX78 707 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 MMP1P03956 469 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 GNA11P29992 359 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 GALNT17Q6IS24 598 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 SLAIN1Q8ND83 568 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 TRPV1Q8NER1 839 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 PDCD2LQ9BRP1 358 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 PCDHA6Q9UN73 950 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 PCDHA8Q9Y5H6 950 aa17.03■□□□□ 0.32
MTHFD1-204ENST00000553405 GRK4P32298 578 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 CYP2C19P33261 490 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 NLRP5P59047 1200 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 AP3B2Q13367 1082 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 ARMCX2Q7L311 632 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 FCHSD1Q86WN1 690 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 TRMT44Q8IYL2 757 aaKnown RBP17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 BLIDQ8IZY5 108 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 REXO1Q8N1G1 1221 aaKnown RBP17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 NSUN6Q8TEA1 469 aaKnown RBP17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 SLC5A4Q9NY91 659 aa17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 BIN2Q9UBW5 565 aaPredicted RBP17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 ADD3Q9UEY8 706 aaKnown RBP17.02■□□□□ 0.32
MTHFD1-204ENST00000553405 RGS20O76081 388 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 HMGCRP04035 888 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 MRPS9P82933 396 aaKnown RBP17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 PGM5Q15124 567 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 EARS2Q5JPH6 523 aaKnown RBP17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 JAKMIP3Q5VZ66 844 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 VSIG10LQ86VR7 867 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 SH3TC2Q8TF17 1288 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 ARMC5Q96C12 935 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 PGBD1Q96JS3 809 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 C8orf76Q96K31 380 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 IWS1Q96ST2 819 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 ANO3Q9BYT9 981 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 MCOLN1Q9GZU1 580 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 MYH7BA7E2Y1 1941 aa17.01■□□□□ 0.31
MTHFD1-204ENST00000553405 ASB14A6NK59 587 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
MTHFD1-204ENST00000553405 NR3C2P08235 984 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 ZNF865P0CJ78 1059 aaPredicted RBP17■□□□□ 0.31
MTHFD1-204ENST00000553405 CYBAP13498 195 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 EIF2AK2P19525 551 aaKnown RBP17■□□□□ 0.31
MTHFD1-204ENST00000553405 SREBF1P36956 1147 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 FOSBP53539 338 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 GUCY1B3Q02153 619 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 CACNB2Q08289 660 aaPredicted RBP17■□□□□ 0.31
MTHFD1-204ENST00000553405 NR5A1Q13285 461 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 COL13A1Q5TAT6 717 aaPredicted RBP17■□□□□ 0.31
MTHFD1-204ENST00000553405 BICD2Q8TD16 824 aa17■□□□□ 0.31
MTHFD1-204ENST00000553405 FAM205CA6NFA0 338 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 BTBD18B2RXH4 712 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 KIF28PB7ZC32 967 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 INHAP05111 366 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 XBP1P17861 261 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 UBXN2AP68543 259 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 TAPT1Q6NXT6 567 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 DIS3L2Q8IYB7 885 aaKnown RBP16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 FAM184AQ8NB25 1140 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 ZNF333Q96JL9 665 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
MTHFD1-204ENST00000553405 KIAA1217Q5T5P2 1943 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 RBM47A0AV96 593 aaKnown RBP16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 SPDYE3A6NKU9 549 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 ADCY6O43306 1168 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 CYP3A4P08684 503 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 PRKAR2AP13861 404 aaKnown RBP16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 ARHGEF16Q5VV41 709 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 PCNX4Q63HM2 1172 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 MCTP2Q6DN12 878 aa16.98■□□□□ 0.31
MTHFD1-204ENST00000553405 SYT1P21579 422 aa16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 U2AF2P26368 475 aaKnown RBP eCLIP16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 KRT2P35908 639 aa16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 SLC9C1Q4G0N8 1177 aa16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 MFSD14CQ5VZR4 134 aa16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 XRRA1Q6P2D8 792 aa16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 FBXO16Q8IX29 292 aaPredicted RBP16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 INPP4AQ96PE3 977 aaPredicted RBP16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 ABHD16BQ9H3Z7 469 aa16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 KIF3AQ9Y496 699 aa16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 RBM19Q9Y4C8 960 aaKnown RBP16.97■□□□□ 0.31
MTHFD1-204ENST00000553405 IGLV3-22A0A075B6J6 115 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 POTEFA5A3E0 1075 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 EIF3JO75822 258 aaKnown RBP16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 ITGB5P18084 799 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms