RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 BRDTQ58F21 947 aaPredicted RBP15.04■□□□□ -0
ACTN1-207ENST00000553290 TMEM63BQ5T3F8 832 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 RNF20Q5VTR2 975 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 SLC43A3Q8NBI5 491 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 PIGSQ96S52 555 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 RMDN3Q96TC7 470 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 POLR3EQ9NVU0 708 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 COL20A1Q9P218 1284 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 BAZ2BQ9UIF8 2168 aaKnown RBP15.03■□□□□ -0
ACTN1-207ENST00000553290 PNMA6FA0A0J9YX94 578 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 PPP1R11O60927 126 aaPredicted RBP15.03■□□□□ -0
ACTN1-207ENST00000553290 CDC45O75419 566 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 PTGS1P23219 599 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 ITGB8P26012 769 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 KIF5BP33176 963 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 ITGA7Q13683 1181 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 TTLL4Q14679 1199 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 STXBP2Q15833 593 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 ARHGEF16Q5VV41 709 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 HOMER1Q86YM7 354 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 ZNF654Q8IZM8 581 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 OR6J1Q8NGC5 347 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 CTCFLQ8NI51 663 aaPredicted RBP15.03■□□□□ -0
ACTN1-207ENST00000553290 TBX21Q9UL17 535 aa15.03■□□□□ -0
ACTN1-207ENST00000553290 LAMA2P24043 3122 aaKnown RBP15.02■□□□□ -0
ACTN1-207ENST00000553290 CCDC69A6NI79 296 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 SH2B2O14492 632 aaPredicted RBP15.02■□□□□ -0
ACTN1-207ENST00000553290 OPLAHO14841 1288 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 CYTH3O43739 400 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 TIMP1P01033 207 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 TXNP10599 105 aaKnown RBP15.02■□□□□ -0
ACTN1-207ENST00000553290 SMARCA1P28370 1054 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 LIFRP42702 1097 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 GNAQP50148 359 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 SLC35G1Q2M3R5 365 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 NFXL1Q6ZNB6 911 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 FAM126BQ8IXS8 530 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 LZTS2Q9BRK4 669 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 GPHNQ9NQX3 736 aaPredicted RBP15.02■□□□□ -0
ACTN1-207ENST00000553290 PXMP2Q9NR77 195 aa15.02■□□□□ -0
ACTN1-207ENST00000553290 KPNA6O60684 536 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 CD4P01730 458 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 NR3C2P08235 984 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 CALM1P0DP23 149 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 CALM2P0DP24 149 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 CALM3P0DP25 149 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 FPGSQ05932 587 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 SHHQ15465 462 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 SPZ1Q9BXG8 430 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 KIAA1217Q5T5P2 1943 aa15.01□□□□□ -0.01
ACTN1-207ENST00000553290 GRIN2DO15399 1336 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 A6NJR5 290 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 GCOM1H8Y6P7 765 aaPredicted RBP15□□□□□ -0.01
ACTN1-207ENST00000553290 EIF3JO75822 258 aaKnown RBP15□□□□□ -0.01
ACTN1-207ENST00000553290 ARIH2O95376 493 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 MYL3P08590 195 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 POLR2MP0CAP2 368 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 EIF2AK2P19525 551 aaKnown RBP15□□□□□ -0.01
ACTN1-207ENST00000553290 PURAQ00577 322 aaKnown RBP15□□□□□ -0.01
ACTN1-207ENST00000553290 C9orf50Q5SZB4 431 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 MFSD5Q6N075 450 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 CCDC62Q6P9F0 684 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 SEPT14Q6ZU15 432 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 COPS5Q92905 334 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 RRP36Q96EU6 259 aaKnown RBP15□□□□□ -0.01
ACTN1-207ENST00000553290 MTG1Q9BT17 334 aaPredicted RBP15□□□□□ -0.01
ACTN1-207ENST00000553290 MYL10Q9BUA6 226 aa15□□□□□ -0.01
ACTN1-207ENST00000553290 GH1P01241 217 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 NEFLP07196 543 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 HOXA13P31271 388 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-207ENST00000553290 PSMC6P62333 389 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 SGMS1Q86VZ5 419 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 TMEM199Q8N511 208 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 NEK1Q96PY6 1258 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 PDCD2LQ9BRP1 358 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 SEC63Q9UGP8 760 aaKnown RBP14.99□□□□□ -0.01
ACTN1-207ENST00000553290 SLC12A7Q9Y666 1083 aa14.99□□□□□ -0.01
ACTN1-207ENST00000553290 PPIGQ13427 754 aaKnown RBP eCLIP14.98□□□□□ -0.011e-12■□□□□ 8.7
ACTN1-207ENST00000553290 COL9A3Q14050 684 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-207ENST00000553290 KRT32Q14532 448 aa14.98□□□□□ -0.01
ACTN1-207ENST00000553290 LY6KQ17RY6 165 aa14.98□□□□□ -0.01
ACTN1-207ENST00000553290 KCNV1Q6PIU1 500 aa14.98□□□□□ -0.01
ACTN1-207ENST00000553290 SYNE3Q6ZMZ3 975 aa14.98□□□□□ -0.01
ACTN1-207ENST00000553290 DEFB123Q8N688 67 aa14.98□□□□□ -0.01
ACTN1-207ENST00000553290 ALDH8A1Q9H2A2 487 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-207ENST00000553290 SCN10AQ9Y5Y9 1956 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 B4GALT4O60513 344 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 SUPT20HL2P0C7V6 817 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 MYCLP12524 364 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-207ENST00000553290 EPHB4P54760 987 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 ARHGAP1Q07960 439 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 PGM5Q15124 567 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 FAM109BQ6ICB4 259 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-207ENST00000553290 VSIG10LQ86VR7 867 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 SRBD1Q8N5C6 995 aaKnown RBP14.97□□□□□ -0.01
ACTN1-207ENST00000553290 FANCBQ8NB91 859 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 PIBF1Q8WXW3 757 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 RNPC3Q96LT9 517 aaKnown RBP14.97□□□□□ -0.01
ACTN1-207ENST00000553290 LRRC2Q9BYS8 371 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms