RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 C6orf50Q9HD87 102 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 PCDHA1Q9Y5I3 950 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 FILIP1Q7Z7B0 1213 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 FBXO11Q86XK2 927 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 KIFC2Q96AC6 838 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 COA7Q96BR5 231 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 SLC38A10Q9HBR0 1119 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.12■□□□□ 0.97
LRP1-204ENST00000553277 SMCO2A6NFE2 343 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L15C9J2P7 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L13C9JLJ4 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L11C9JVI0 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L18D6R9N7 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L22D6RA61 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L17D6RBQ6 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L19D6RCP7 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L20D6RJB6 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 SMC2O95347 1197 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 TNNT1P13805 278 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 USP17L24Q0WX57 530 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 MOGSQ13724 837 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 TPD52L1Q16890 204 aaPredicted RBP21.12■□□□□ 0.97
LRP1-204ENST00000553277 NYAP1Q6ZVC0 841 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 TANGO6Q9C0B7 1094 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 ZNF408Q9H9D4 720 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 RIC8AQ9NPQ8 531 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 PNMA2Q9UL42 364 aa21.12■□□□□ 0.97
LRP1-204ENST00000553277 SMCHD1A6NHR9 2005 aa21.11■□□□□ 0.97
LRP1-204ENST00000553277 ADAMTS3O15072 1205 aa21.11■□□□□ 0.97
LRP1-204ENST00000553277 FLOT1O75955 427 aa21.11■□□□□ 0.97
LRP1-204ENST00000553277 GJA5P36382 358 aa21.11■□□□□ 0.97
LRP1-204ENST00000553277 COG2Q14746 738 aa21.11■□□□□ 0.97
LRP1-204ENST00000553277 PYM1Q9BRP8 204 aaKnown RBP21.11■□□□□ 0.97
LRP1-204ENST00000553277 ZNF536O15090 1300 aa21.1■□□□□ 0.97
LRP1-204ENST00000553277 ACTN4O43707 911 aaKnown RBP21.1■□□□□ 0.97
LRP1-204ENST00000553277 ICAM1P05362 532 aa21.1■□□□□ 0.97
LRP1-204ENST00000553277 DSG3P32926 999 aa21.1■□□□□ 0.97
LRP1-204ENST00000553277 MORC3Q14149 939 aa21.1■□□□□ 0.97
LRP1-204ENST00000553277 VWA5AO00534 786 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 RIOK3O14730 519 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 POLR2DO15514 142 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 CLK2P49760 499 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 EARS2Q5JPH6 523 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 CCAR2Q8N163 923 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 CCDC112Q8NEF3 446 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 ENOX1Q8TC92 643 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 SMARCE1Q969G3 411 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 HOXC10Q9NYD6 342 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 MAN1B1Q9UKM7 699 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 PCDHA6Q9UN73 950 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 PCDHA8Q9Y5H6 950 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 ATP2A1O14983 1001 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 SFPQP23246 707 aaKnown RBP eCLIP21.09■□□□□ 0.97
LRP1-204ENST00000553277 ERCC5P28715 1186 aaPredicted RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 ADCY7P51828 1080 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 MRPL12P52815 198 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 SNAP25P60880 206 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 ARID5BQ14865 1188 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 FASTKD5Q7L8L6 764 aaKnown RBP21.09■□□□□ 0.97
LRP1-204ENST00000553277 REPS2Q8NFH8 660 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 CSRNP2Q9H175 543 aa21.09■□□□□ 0.97
LRP1-204ENST00000553277 OPLAHO14841 1288 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 CCP110O43303 1012 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 OAZ1P54368 228 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 SNAPC2Q13487 334 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 TREML2Q5T2D2 321 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 LBX2Q6XYB7 198 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 TMC6Q7Z403 805 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 REXO1Q8N1G1 1221 aaKnown RBP21.08■□□□□ 0.96
LRP1-204ENST00000553277 CUL5Q93034 780 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 WNK4Q96J92 1243 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 MS4A4AQ96JQ5 239 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 C16orf45Q96MC5 204 aaPredicted RBP21.08■□□□□ 0.96
LRP1-204ENST00000553277 PSTPIP2Q9H939 334 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 SERTAD1Q9UHV2 236 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 AGTPBP1Q9UPW5 1226 aa21.08■□□□□ 0.96
LRP1-204ENST00000553277 PIK3CDO00329 1044 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 SLFN14P0C7P3 912 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 ZBTB48P10074 688 aaPredicted RBP21.07■□□□□ 0.96
LRP1-204ENST00000553277 BMP6P22004 513 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 UBASH3AP57075 661 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 GHRHRQ02643 423 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 GRIN1Q05586 938 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 CEP135Q66GS9 1140 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 SH3RF1Q7Z6J0 888 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 SMC1BQ8NDV3 1235 aa21.07■□□□□ 0.96
LRP1-204ENST00000553277 RBM10P98175 930 aaKnown RBP21.06■□□□□ 0.96
LRP1-204ENST00000553277 PTPN14Q15678 1187 aa21.06■□□□□ 0.96
LRP1-204ENST00000553277 MCTP2Q6DN12 878 aa21.06■□□□□ 0.96
LRP1-204ENST00000553277 ARMCX5Q6P1M9 558 aa21.06■□□□□ 0.96
LRP1-204ENST00000553277 KRT25Q7Z3Z0 450 aa21.06■□□□□ 0.96
LRP1-204ENST00000553277 ABCB11O95342 1321 aa21.06■□□□□ 0.96
LRP1-204ENST00000553277 SPDYE16A6NNV3 312 aaPredicted RBP21.05■□□□□ 0.96
LRP1-204ENST00000553277 MEIS2O14770 477 aa21.05■□□□□ 0.96
LRP1-204ENST00000553277 ZBED4O75132 1171 aa21.05■□□□□ 0.96
LRP1-204ENST00000553277 SERPINC1P01008 464 aa21.05■□□□□ 0.96
LRP1-204ENST00000553277 ATP2C1P98194 919 aaPredicted RBP21.05■□□□□ 0.96
LRP1-204ENST00000553277 SPRYD7Q5W111 196 aa21.05■□□□□ 0.96
LRP1-204ENST00000553277 GPAT2Q6NUI2 795 aa21.05■□□□□ 0.96
LRP1-204ENST00000553277 VSTM4Q8IW00 320 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms