RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 ARMC9Q7Z3E5 817 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 SPATA21Q7Z572 469 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 RASSF3Q86WH2 238 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 NKAIN3Q8N8D7 197 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 GBP7Q8N8V2 638 aaPredicted RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 TRPM4Q8TD43 1214 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 KCNN1Q92952 543 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 SH3KBP1Q96B97 665 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 SKA1Q96BD8 255 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 MIEF2Q96C03 454 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 CFAP36Q96G28 342 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 RBM17Q96I25 401 aaKnown RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 EPSTI1Q96J88 318 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 NECAB3Q96P71 396 aaPredicted RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 C2orf49Q9BVC5 232 aaPredicted RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 SELENOOQ9BVL4 669 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 TRIM8Q9BZR9 551 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 DNAI2Q9GZS0 605 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 CCDC113Q9H0I3 377 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 TMX1Q9H3N1 280 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 TMOD3Q9NYL9 352 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 CABP1Q9NZU7 370 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 THEGQ9P2T0 379 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 CTNNA3Q9UI47 895 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 PPP1R9AQ9ULJ8 1098 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 TRAF3IP3Q9Y228 551 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 MRPL11Q9Y3B7 192 aaKnown RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 USP34Q70CQ2 3546 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 COL4A5P29400 1685 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 FAM208AQ9UK61 1670 aaKnown RBP5.52□□□□□ -1.53
PFDN5-219ENST00000553171 FAM208BQ5VWN6 2430 aa5.52□□□□□ -1.53
PFDN5-219ENST00000553171 ANKRD31Q8N7Z5 1873 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 NCOR2Q9Y618 2525 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 CDHR2Q9BYE9 1310 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 C5orf42Q9H799 3197 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 PRR33A8MZF0 331 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 H0YC42 278 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ENPP3O14638 875 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 SGSM2O43147 1006 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 CEP104O60308 925 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 KPNA6O60684 536 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 STAMBPO95630 424 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 PYGBP11216 843 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 BMP1P13497 986 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 CA8P35219 290 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 KIF11P52732 1056 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 TUBA1BP68363 451 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ADCY1Q08828 1119 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 MTFR1Q15390 333 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ATP2B3Q16720 1220 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 SKOR2Q2VWA4 1001 aaPredicted RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ZC3H12BQ5HYM0 836 aaKnown RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 SH2D4BQ5SQS7 431 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 CDCA2Q69YH5 1023 aaPredicted RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 MICALCLQ6ZW33 695 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 TUBA1AQ71U36 451 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 RUFY3Q7L099 469 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 LURAP1LQ8IV03 231 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 LILRB2Q8N423 598 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ZNF713Q8N859 430 aaPredicted RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 MSANTD4Q8NCY6 345 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 NELL1Q92832 810 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ARHGEF2Q92974 986 aaKnown RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ASIC4Q96FT7 647 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 LTV1Q96GA3 475 aaPredicted RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 NLRP3Q96P20 1036 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 TNMDQ9H2S6 317 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 TTYH1Q9H313 450 aaPredicted RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 BCL2L12Q9HB09 334 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 CYP4F11Q9HBI6 524 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 LUC7LQ9NQ29 371 aaKnown RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ENAMQ9NRM1 1142 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 LMCD1Q9NZU5 365 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 TFIP11Q9UBB9 837 aaKnown RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 NARFQ9UHQ1 456 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 ZMYND8Q9ULU4 1186 aaPredicted RBP5.51□□□□□ -1.53
PFDN5-219ENST00000553171 GTF2A1LQ9UNN4 478 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 CEP131Q9UPN4 1083 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 SSX2IPQ9Y2D8 614 aa5.51□□□□□ -1.53
PFDN5-219ENST00000553171 SOS1Q07889 1333 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 ARFGEF2Q9Y6D5 1785 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 FAM86C2PA6NEL3 165 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 EIF3FO00303 357 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 P4HA2O15460 535 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 DIAPH2O60879 1101 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 NEBLO76041 1014 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 ARIH2O95376 493 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 RPSAP08865 295 aaKnown RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 SFTPCP11686 197 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 XRCC5P13010 732 aaKnown RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 RAC2P15153 192 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 FERP16591 822 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 GNAT2P19087 354 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 HPDP32754 393 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 CAP2P40123 477 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 GMPSP49915 693 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 MDM2Q00987 491 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 SP3Q02447 781 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms