RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 PLCD3Q8N3E9 789 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 ZKSCAN4Q969J2 545 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 CCPG1Q9ULG6 757 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 PCDHA12Q9UN75 941 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 MRPL11Q9Y3B7 192 aaKnown RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 NFE2L3Q9Y4A8 694 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 SYNRGQ9UMZ2 1314 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 POLR2MP0CAP2 368 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 ASIC1P78348 528 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 SPP2Q13103 211 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 LPAR1Q92633 364 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 MRFAP1L1Q96HT8 127 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 MTMR9Q96QG7 549 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 SLF1Q9BQI6 1058 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 XPO4Q9C0E2 1151 aaKnown RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 RANBP17Q9H2T7 1088 aaKnown RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 AS3MTQ9HBK9 375 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 FANCLQ9NW38 375 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 VGLL3A8MV65 326 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 RPN1P04843 607 aaKnown RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 ATP1A3P13637 1013 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 USP11P51784 963 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 FANCCQ00597 558 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 AMPD3Q01432 767 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 NCAPHQ15003 741 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 CREBRFQ8IUR6 639 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 IGSF22Q8N9C0 903 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 SYT17Q9BSW7 474 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 EHMT1Q9H9B1 1298 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 HOMER2Q9NSB8 354 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 CTNND2Q9UQB3 1225 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 SBF1O95248 1867 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 USP14P54578 494 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 FMR1Q06787 632 aaKnown RBP eCLIP9.29□□□□□ -0.92
RAB5B-210ENST00000553116 NAALADL2Q58DX5 795 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 LDHDQ86WU2 507 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 SCYL3Q8IZE3 742 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 PRPF38AQ8NAV1 312 aaKnown RBP9.29□□□□□ -0.92
RAB5B-210ENST00000553116 CUEDC2Q9H467 287 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 GINM1Q9NU53 330 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 NRBP1Q9UHY1 535 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 DOCK1Q14185 1865 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 CBFA2T2O43439 604 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 SSBP05455 408 aaKnown RBP eCLIP9.29□□□□□ -0.92
RAB5B-210ENST00000553116 UBASH3AP57075 661 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 UBXN2AP68543 259 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 SPATA20Q8TB22 786 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-210ENST00000553116 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 MAGEF1Q9HAY2 307 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 MAPK8IP1Q9UQF2 711 aa9.29□□□□□ -0.92
RAB5B-210ENST00000553116 ABCB11O95342 1321 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 ALAS1P13196 640 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 VCAM1P19320 739 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 CDC25BP30305 580 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 CCT6AP40227 531 aaKnown RBP9.28□□□□□ -0.92
RAB5B-210ENST00000553116 STIM1Q13586 685 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 SUPT20HL1Q3ZLR7 823 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 SV2BQ7L1I2 683 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 TMC6Q7Z403 805 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 MTRQ99707 1265 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 RPAP3Q9H6T3 665 aaPredicted RBP9.28□□□□□ -0.92
RAB5B-210ENST00000553116 EXOC1Q9NV70 894 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 ZHX2Q9Y6X8 837 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 PLA2G6O60733 806 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 ERCC5P28715 1186 aaPredicted RBP9.28□□□□□ -0.92
RAB5B-210ENST00000553116 SREBF1P36956 1147 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 C9orf131Q5VYM1 1079 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 SULF1Q8IWU6 871 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 SLFN12Q8IYM2 578 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 LARP4BQ92615 738 aaKnown RBP9.28□□□□□ -0.92
RAB5B-210ENST00000553116 DCPSQ96C86 337 aaKnown RBP9.28□□□□□ -0.92
RAB5B-210ENST00000553116 AGBL1Q96MI9 1066 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 EDIL3O43854 480 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 MYL1P05976 194 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 PDIA5Q14554 519 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 NCAPH2Q6IBW4 605 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 ZNF280CQ8ND82 737 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 ENOX1Q8TC92 643 aaKnown RBP9.28□□□□□ -0.92
RAB5B-210ENST00000553116 TBC1D5Q92609 795 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 HAS1Q92839 578 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 KBTBD4Q9NVX7 518 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 GDAQ9Y2T3 454 aa9.28□□□□□ -0.92
RAB5B-210ENST00000553116 KDM3AQ9Y4C1 1321 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 OPLAHO14841 1288 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 COBLO75128 1261 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 IDEP14735 1019 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 CLCN1P35523 988 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 HIRAP54198 1017 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-210ENST00000553116 HMGCS2P54868 508 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 KMT5BQ4FZB7 885 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 ZNF658Q5TYW1 1059 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-210ENST00000553116 MMTAG2Q9BU76 263 aaKnown RBP9.27□□□□□ -0.93
RAB5B-210ENST00000553116 RAVER2Q9HCJ3 691 aaKnown RBP9.27□□□□□ -0.93
RAB5B-210ENST00000553116 ADARB2Q9NS39 739 aaKnown RBP9.27□□□□□ -0.93
RAB5B-210ENST00000553116 STK17AQ9UEE5 414 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 PPP2R3BQ9Y5P8 575 aa9.27□□□□□ -0.93
RAB5B-210ENST00000553116 PIK3CDO00329 1044 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms