RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 PRR16Q569H4 304 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 BTNL9Q6UXG8 535 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 NLGN2Q8NFZ4 835 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 LARP4BQ92615 738 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 CCDC47Q96A33 483 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 ZNF341Q9BYN7 854 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 SH2D4AQ9H788 454 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 MAGEF1Q9HAY2 307 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 EXOC1Q9NV70 894 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 KLRC4O43908 158 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 TBC1D12O60347 775 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 MYL1P05976 194 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 AMPD3Q01432 767 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 STIM1Q13586 685 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 SV2BQ7L1I2 683 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 DYMQ7RTS9 669 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 P2RX7Q99572 595 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 NAP1L4Q99733 375 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 FBXO28Q9NVF7 368 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 TRMT1Q9NXH9 659 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 CNOT7Q9UIV1 285 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 RWDD2AQ9UIY3 292 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 CD2APQ9Y5K6 639 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 SRCAPQ6ZRS2 3230 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 RPS12P25398 132 aaKnown RBP10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 PDIA5Q14554 519 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 CHURC1Q8WUH1 139 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 PNMA5Q96PV4 448 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 SYNPO2Q9UMS6 1093 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 USP27XA6NNY8 438 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 TEX33O43247 280 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 RHOBTB3O94955 611 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 SSBP05455 408 aaKnown RBP eCLIP10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 FCER1AP12319 257 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 IDEP14735 1019 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 ZNF76P36508 570 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 USP11P51784 963 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 KCNB1Q14721 858 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 SPECC1LQ69YQ0 1117 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 HPS3Q969F9 1004 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 BLOC1S4Q9NUP1 217 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 STK17AQ9UEE5 414 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 HACL1Q9UJ83 578 aa10.19□□□□□ -0.78
RAB3IP-218ENST00000553099 PSMA7O14818 248 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 OPLAHO14841 1288 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 PRELPP51888 382 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 ZNF280AP59817 542 aaPredicted RBP10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 FILIP1LQ4L180 1135 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 CDKAL1Q5VV42 579 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 KCNK18Q7Z418 384 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 ADSSL1Q8N142 457 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 EEF2KMTQ96G04 330 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 TRIM47Q96LD4 638 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 SGIP1Q9BQI5 828 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 PGAP2Q9UHJ9 254 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 ZNF541Q9H0D2 1346 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 A0A1B0GTH6 734 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 PES1O00541 588 aaKnown RBP10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 FOSP01100 380 aaPredicted RBP10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 STAT3P40763 770 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 PMS1P54277 932 aaKnown RBP10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 UBXN2AP68543 259 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 DGKZQ13574 1117 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 ECM1Q16610 540 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 GIMAP8Q8ND71 665 aaPredicted RBP10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 ANKRD20A12PQ8NF67 263 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 TBC1D5Q92609 795 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 TEPSINQ96N21 525 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 CTAGE1Q96RT6 745 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 C7orf25Q9BPX7 421 aa10.18□□□□□ -0.78
RAB3IP-218ENST00000553099 MYMKA6NI61 221 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 KCNJ18B7U540 433 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 FAM86B1E9PN63 330 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 FAM86B2P0C5J1 330 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 ADKP55263 362 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 STK4Q13043 487 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 KCNJ12Q14500 433 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 NR1I3Q14994 352 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 KRT31Q15323 416 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 PRAMEF18Q5VWM3 479 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 NCAPH2Q6IBW4 605 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 RAD54LQ92698 747 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 DEFB129Q9H1M3 183 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 VPS16Q9H269 839 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 SLC39A2Q9NP94 309 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 TAB2Q9NYJ8 693 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 PHF20L1A8MW92 1017 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 POTECB2RU33 542 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 N4BP3O15049 544 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 TNNT1P13805 278 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 SREBF1P36956 1147 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 PTGER2P43116 358 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 SLFN12Q8IYM2 578 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 CYP2W1Q8TAV3 490 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 CPLX3Q8WVH0 158 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
RAB3IP-218ENST00000553099 KCNMB3Q9NPA1 279 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms