RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 DYNLL1P63167 89 aaKnown RBP5.38□□□□□ -1.55
LIMA1-214ENST00000552783 UAP1Q16222 522 aaPredicted RBP5.38□□□□□ -1.55
LIMA1-214ENST00000552783 TSR1Q2NL82 804 aaKnown RBP5.38□□□□□ -1.55
LIMA1-214ENST00000552783 ACCSLQ4AC99 568 aa5.38□□□□□ -1.55
LIMA1-214ENST00000552783 FAM47AQ5JRC9 791 aa5.38□□□□□ -1.55
LIMA1-214ENST00000552783 IFIT1BQ5T764 474 aaKnown RBP5.38□□□□□ -1.55
LIMA1-214ENST00000552783 FAXDC2Q96IV6 333 aa5.38□□□□□ -1.55
LIMA1-214ENST00000552783 KRT12Q99456 494 aa5.38□□□□□ -1.55
LIMA1-214ENST00000552783 NOC4LQ9BVI4 516 aaKnown RBP5.38□□□□□ -1.55
LIMA1-214ENST00000552783 CARD10Q9BWT7 1032 aa5.38□□□□□ -1.55
LIMA1-214ENST00000552783 CNNM2Q9H8M5 875 aa5.38□□□□□ -1.55
LIMA1-214ENST00000552783 DISC1Q9NRI5 854 aa5.38□□□□□ -1.55
LIMA1-214ENST00000552783 CNTNAP5Q8WYK1 1306 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 MARCH6O60337 910 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 KIAA0754O94854 1291 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 FGFR2P21802 821 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ELF1P32519 619 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 DDB1Q16531 1140 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SLC35G1Q2M3R5 365 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CEP85LQ5SZL2 805 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CFAP58Q5T655 872 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 EMBQ6PCB8 327 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CATIPQ7Z7H3 387 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 FNBP4Q8N3X1 1017 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 GIMAP8Q8ND71 665 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 TRIM58Q8NG06 486 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ESR2Q92731 530 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CYFIP2Q96F07 1278 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ZSCAN10Q96SZ4 725 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 RUFY1Q96T51 708 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 PACSIN1Q9BY11 444 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SEMA6BQ9H3T3 888 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 RNF41Q9H4P4 317 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SLC24A3Q9HC58 644 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 GDF3Q9NR23 364 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 TPX2Q9ULW0 747 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 STX8Q9UNK0 236 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 PLAGL2Q9UPG8 496 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 PLAAQ9Y263 795 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 KCPQ6ZWJ8 1503 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 DISP2A7MBM2 1401 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 MAGEB6P1A0A0J9YX57 407 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 PHF20L1A8MW92 1017 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 RAD51CO43502 376 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 PPP1R12BO60237 982 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 RPSAP08865 295 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 EEF1GP26641 437 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SMTNP53814 917 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ENOX2Q16206 610 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 PREPLQ4J6C6 727 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CCDC181Q5TID7 509 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ALS2CLQ60I27 953 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CYB5D1Q6P9G0 228 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 B4GALNT4Q76KP1 1039 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 RRAGAQ7L523 313 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 KLHL7Q8IXQ5 586 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CCDC170Q8IYT3 715 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 FUKQ8N0W3 1084 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 KIAA0895Q8NCT3 520 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 EHBP1Q8NDI1 1231 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CERKQ8TCT0 537 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ZNF384Q8TF68 577 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 MIEF2Q96C03 454 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ZNF512BQ96KM6 892 aaPredicted RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 THAP9Q9H5L6 903 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 VAT1LQ9HCJ6 419 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SIK3Q9Y2K2 1263 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 H0YGN5 161 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CHUKO15111 745 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 TLR2O60603 784 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 TACC1O75410 805 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 MTIF2P46199 727 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ERVK-9P63128 1117 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SPA17Q15506 151 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CCDC178Q5BJE1 867 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 FAM182BQ5T319 152 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 UBAP2Q5T6F2 1119 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SUSD4Q5VX71 490 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 TMTC3Q6ZXV5 915 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 DZIP1Q86YF9 867 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 MDM1Q8TC05 714 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ATP6V1G3Q96LB4 118 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SCLT1Q96NL6 688 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 MTFR1LQ9H019 292 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 CPVLQ9H3G5 476 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 MMRN2Q9H8L6 949 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ZNHIT6Q9NWK9 470 aaKnown RBP5.37□□□□□ -1.55
LIMA1-214ENST00000552783 ANKIB1Q9P2G1 1089 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 LEMD3Q9Y2U8 911 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 HYOU1Q9Y4L1 999 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 NFS1Q9Y697 457 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 COL4A1P02462 1669 aa5.37□□□□□ -1.55
LIMA1-214ENST00000552783 C21orf2O43822 256 aa5.36□□□□□ -1.55
LIMA1-214ENST00000552783 AKR1B10O60218 316 aa5.36□□□□□ -1.55
LIMA1-214ENST00000552783 PALMO75781 387 aa5.36□□□□□ -1.55
LIMA1-214ENST00000552783 RHOBTB3O94955 611 aa5.36□□□□□ -1.55
LIMA1-214ENST00000552783 IPO7O95373 1038 aaKnown RBP5.36□□□□□ -1.55
LIMA1-214ENST00000552783 FAM107AO95990 144 aa5.36□□□□□ -1.55
LIMA1-214ENST00000552783 DSG3P32926 999 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms