RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 CGNQ9P2M7 1197 aaKnown RBP6.88□□□□□ -1.31
CHMP4A-210ENST00000552620 RIPOR2Q9Y4F9 1068 aa6.88□□□□□ -1.31
CHMP4A-210ENST00000552620 CLIC4Q9Y696 253 aa6.88□□□□□ -1.31
CHMP4A-210ENST00000552620 MYH15Q9Y2K3 1946 aa6.88□□□□□ -1.31
CHMP4A-210ENST00000552620 GLI3P10071 1580 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 A0A1B0GVL5 298 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 ANKRD18BA2A2Z9 1011 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 CCDC69A6NI79 296 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 GOLGA8BA8MQT2 603 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 GPR25O00155 361 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 FOXP2O15409 715 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 GPAA1O43292 621 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 SIN3BO75182 1162 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 ZNF202O95125 648 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 ADD2P35612 726 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 NDUFA8P51970 172 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 RACK1P63244 317 aaKnown RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 CCZ1BP86790 482 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 CCZ1P86791 482 aaPredicted RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 CTBSQ01459 385 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 GUCY1B3Q02153 619 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 KIF23Q02241 960 aaPredicted RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 SLC39A14Q15043 492 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 ATP2B3Q16720 1220 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 AXDND1Q5T1B0 1012 aaPredicted RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 ZNF468Q5VIY5 522 aaPredicted RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 TTLL5Q6EMB2 1281 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 TOM1L2Q6ZVM7 507 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 SV2BQ7L1I2 683 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 SYT9Q86SS6 491 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 CCAR2Q8N163 923 aaKnown RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 VWA5B2Q8N398 1253 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 TMEM102Q8N9M5 508 aaPredicted RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 KIF18AQ8NI77 898 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 WASF1Q92558 559 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 C16orf45Q96MC5 204 aaPredicted RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 MTA3Q9BTC8 594 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 AVENQ9NQS1 362 aaPredicted RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 ANGEL1Q9UNK9 670 aaKnown RBP6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 NUP188Q5SRE5 1749 aa6.87□□□□□ -1.31
CHMP4A-210ENST00000552620 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 ZMYM6O95789 1325 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 MAP3K15Q6ZN16 1313 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 A0A0G2JLW4 131 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 PDE2AO00408 941 aaPredicted RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 SH2B2O14492 632 aaPredicted RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 CUTAO60888 179 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 SMNDC1O75940 238 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 ACPPP15309 386 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 EIF2AK2P19525 551 aaKnown RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 ITPKAP23677 461 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 ADORA1P30542 326 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 LIFRP42702 1097 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 TNNI2P48788 182 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 ANTXR2P58335 489 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 MLLT1Q03111 559 aaPredicted RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 TRIM29Q14134 588 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 METTL24Q5JXM2 366 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 SGMS1Q86VZ5 419 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 MICALL1Q8N3F8 863 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 AOPEPQ8N6M6 819 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 ERO1AQ96HE7 468 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 PBX4Q9BYU1 374 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 FTOQ9C0B1 505 aaKnown RBP eCLIP6.86□□□□□ -1.311e-12■■■■□ 25.8
CHMP4A-210ENST00000552620 PUS7LQ9H0K6 701 aaKnown RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 PRDM11Q9NQV5 511 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 DNAJB12Q9NXW2 375 aaKnown RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 PRKAG2Q9UGJ0 569 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 HOOK1Q9UJC3 728 aaKnown RBP6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 TUBE1Q9UJT0 475 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 HPSEQ9Y251 543 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 UBR2Q8IWV8 1755 aa6.86□□□□□ -1.31
CHMP4A-210ENST00000552620 TJP1Q07157 1748 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 STK36Q9NRP7 1315 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 A0A096LPE4 126 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 A0A1W2PPZ6 126 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 ERVV-1B6SEH8 477 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 H3BM21 787 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 J3QW42 95 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 GNAT2P19087 354 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 ATP2B1P20020 1258 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 MX2P20592 715 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 SFPQP23246 707 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 U2AF2P26368 475 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 DNAJA1P31689 397 aaKnown RBP6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 SYKP43405 635 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 GRIA4P48058 902 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 METAP2P50579 478 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 EVA1CP58658 441 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 HAND2P61296 217 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 FAM193AP78312 1265 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 ARID5AQ03989 594 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 DMTNQ08495 405 aa6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 NCBP1Q09161 790 aaKnown RBP6.85□□□□□ -1.31
CHMP4A-210ENST00000552620 NCAPHQ15003 741 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms