RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 NECAB3Q96P71 396 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 TMEM47Q9BQJ4 181 aa16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 CERS4Q9HA82 394 aa16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 ZBTB47Q9UFB7 747 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 RFXAPO00287 272 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 BAIAP3O94812 1187 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 FGRP09769 529 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 IQCF3P0C7M6 154 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 PLA2G5P39877 138 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 ALX1Q15699 326 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 CLEC4DQ8WXI8 215 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 ARNTL2Q8WYA1 636 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 FAM122AQ96E09 287 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 TCP11L1Q9NUJ3 509 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
CHMP1A-210ENST00000551981 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 EDNRBP24530 442 aa16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 KCNJ6P48051 423 aa16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 KCNQ1P51787 676 aa16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 RPS6P62753 249 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 EVI5LQ96CN4 794 aa16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
CHMP1A-210ENST00000551981 PDHBP11177 359 aa16.67■□□□□ 0.26
CHMP1A-210ENST00000551981 CHMP4BP1P59074 171 aa16.67■□□□□ 0.26
CHMP1A-210ENST00000551981 TAP1Q03518 808 aa16.67■□□□□ 0.26
CHMP1A-210ENST00000551981 CAGE1Q8TC20 777 aa16.67■□□□□ 0.26
CHMP1A-210ENST00000551981 TRIP12Q14669 1992 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 EPOPA6NHQ4 379 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 TLL1O43897 1013 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 ZNF543Q08ER8 600 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 PTGISQ16647 500 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 AFAP1L1Q8TED9 768 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 PPP1R13LQ8WUF5 828 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 COPS5Q92905 334 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 HLA-CQ95604 372 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 TTC14Q96N46 770 aa16.66■□□□□ 0.26
CHMP1A-210ENST00000551981 FGAP02671 866 aa16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 PCP11498 1178 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 RGS22Q8NE09 1264 aa16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 TET1Q8NFU7 2136 aa16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 MAF1Q9H063 256 aa16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 PCDHB15Q9Y5E8 787 aa16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 COL4A4P53420 1690 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
CHMP1A-210ENST00000551981 PARNO95453 639 aaKnown RBP16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 SNHG28P0DPA3 235 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 GRB10Q13322 594 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 USH1GQ495M9 461 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 MCMDC2Q4G0Z9 681 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 GPATCH4Q5T3I0 446 aaKnown RBP16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 KRT40Q6A162 431 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 MFSD6Q6ZSS7 791 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 ZBED2Q9BTP6 218 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 PTPRSQ13332 1948 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 SALL3Q9BXA9 1300 aa16.64■□□□□ 0.25
CHMP1A-210ENST00000551981 KIAA1217Q5T5P2 1943 aa16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 GH1P01241 217 aa16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 MMP3P08254 477 aa16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 SELPP16109 830 aa16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 WDR5P61964 334 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 AFG1LQ8WV93 481 aa16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 HCN4Q9Y3Q4 1203 aa16.63■□□□□ 0.25
CHMP1A-210ENST00000551981 ARHGEF15O94989 841 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 ARIH2O95376 493 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 CASTP20810 708 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 HAND2P61296 217 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 CCDC62Q6P9F0 684 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 CNKSR3Q6P9H4 555 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 SEPT14Q6ZU15 432 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 LRRC8DQ7L1W4 858 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 NSUN6Q8TEA1 469 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 LMCD1Q9NZU5 365 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 ABCB11O95342 1321 aa16.62■□□□□ 0.25
CHMP1A-210ENST00000551981 MYH6P13533 1939 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 A0A0D9SFI3 127 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 EFCAB14O75071 495 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 ARHGAP1Q07960 439 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 STXBP2Q15833 593 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 DGKDQ16760 1214 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 LY6KQ17RY6 165 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 ANKRD45Q5TZF3 282 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 MCF2L2Q86YR7 1114 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 ESR2Q92731 530 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-210ENST00000551981 LPXNO60711 386 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 NT5C2P49902 561 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 MFAP1P55081 439 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms