RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 SNRNP48Q6IEG0 339 aaKnown RBP16.09■□□□□ 0.17
LETMD1-229ENST00000551261 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.09■□□□□ 0.17
LETMD1-229ENST00000551261 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 CPXCR1Q8N123 301 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 KCTD17Q8N5Z5 321 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 FAM20AQ96MK3 541 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 TRERF1Q96PN7 1200 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 MTMR9Q96QG7 549 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 CCSER1Q9C0I3 900 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 ZNF408Q9H9D4 720 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 CCDC39Q9UFE4 941 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 PFASO15067 1338 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
LETMD1-229ENST00000551261 TRAF5O00463 557 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 SLC25A27O95847 323 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 MYL1P05976 194 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 STAT3P40763 770 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 DGKZQ13574 1117 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 ZRSR1Q15695 479 aaKnown RBP16.08■□□□□ 0.16
LETMD1-229ENST00000551261 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
LETMD1-229ENST00000551261 DLK2Q6UY11 383 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 RIOX2Q8IUF8 465 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 IGSF22Q8N9C0 903 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 IQUBQ8NA54 791 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 SYMPKQ92797 1274 aaKnown RBP16.08■□□□□ 0.16
LETMD1-229ENST00000551261 WNK4Q96J92 1243 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.16
LETMD1-229ENST00000551261 KCNMB3Q9NPA1 279 aa16.08■□□□□ 0.16
LETMD1-229ENST00000551261 COL11A1P12107 1806 aaPredicted RBP16.08■□□□□ 0.16
LETMD1-229ENST00000551261 MARCH6O60337 910 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 STAM2O75886 525 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 TDP2O95551 362 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 ITGBL1O95965 494 aaPredicted RBP16.07■□□□□ 0.16
LETMD1-229ENST00000551261 BCRP11274 1271 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 UBA7P41226 1012 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 HERVK_113P62684 666 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 TMEM132BQ14DG7 1078 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 TREML2Q5T2D2 321 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 SASS6Q6UVJ0 657 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 KRBA2Q6ZNG9 492 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 MOB2Q70IA6 237 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 ANKRD23Q86SG2 305 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 CEP57L1Q8IYX8 460 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 CNNM3Q8NE01 707 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 TMEM60Q9H2L4 133 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 TSPY26PQ9H489 355 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 KDM3AQ9Y4C1 1321 aa16.07■□□□□ 0.16
LETMD1-229ENST00000551261 FSD2A1L4K1 749 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 NFIBO00712 420 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 SLFN14P0C7P3 912 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 HOXA13P31271 388 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-229ENST00000551261 ZNF76P36508 570 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 MRE11P49959 708 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 MOGSQ13724 837 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 PCNX4Q63HM2 1172 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 HAUS3Q68CZ6 603 aa16.06■□□□□ 0.16
LETMD1-229ENST00000551261 ASCC2Q9H1I8 757 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-229ENST00000551261 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 B4DLN1 442 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 SLC37A4O43826 429 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 GCLCP48506 637 aaPredicted RBP16.05■□□□□ 0.16
LETMD1-229ENST00000551261 RPS6P62753 249 aaKnown RBP16.05■□□□□ 0.16
LETMD1-229ENST00000551261 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
LETMD1-229ENST00000551261 TPRNQ4KMQ1 711 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 CEP55Q53EZ4 464 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 SPRYD7Q5W111 196 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 FCHSD1Q86WN1 690 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 SHCBP1Q8NEM2 672 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 DNERQ8NFT8 737 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 ERMNQ8TAM6 284 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 SYTL5Q8TDW5 730 aaPredicted RBP16.05■□□□□ 0.16
LETMD1-229ENST00000551261 CALML4Q96GE6 196 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 MPHOSPH6Q99547 160 aaKnown RBP16.05■□□□□ 0.16
LETMD1-229ENST00000551261 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
LETMD1-229ENST00000551261 DISC1Q9NRI5 854 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
LETMD1-229ENST00000551261 POLR2DO15514 142 aaKnown RBP16.04■□□□□ 0.16
LETMD1-229ENST00000551261 CCNA1P78396 465 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 GRIN1Q05586 938 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 STX1AQ16623 288 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 KRT79Q5XKE5 535 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 TRIML1Q8N9V2 468 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 SMC1BQ8NDV3 1235 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 RASSF8Q8NHQ8 419 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 ETNPPLQ8TBG4 499 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 GTPBP4Q9BZE4 634 aaKnown RBP16.04■□□□□ 0.16
LETMD1-229ENST00000551261 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 SPATC1LQ9H0A9 340 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 NT5C3AQ9H0P0 336 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 TTC12Q9H892 705 aaPredicted RBP16.04■□□□□ 0.16
LETMD1-229ENST00000551261 HOMER2Q9NSB8 354 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 KIAA1468Q9P260 1216 aa16.04■□□□□ 0.16
LETMD1-229ENST00000551261 STK17AQ9UEE5 414 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms