RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 RBM47A0AV96 593 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 FUT2Q10981 343 aa17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 C7orf61Q8IZ16 206 aa17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 KLHDC9Q8NEP7 349 aa17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 IL17RAQ96F46 866 aa17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 TSEN34Q9BSV6 310 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 SENP6Q9GZR1 1112 aaPredicted RBP17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 PXMP2Q9NR77 195 aa17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 PHF24Q9UPV7 400 aa17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 Q9Y3F1 56 aa17.8■□□□□ 0.44
PRPF40B-211ENST00000551063 BAZ2BQ9UIF8 2168 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 MOXD2PA6NHM9 499 aa17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 MYCNP04198 464 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 SMPD1P17405 629 aa17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 CDC27P30260 824 aa17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 ARHGEF16Q5VV41 709 aa17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 CCDC82Q8N4S0 544 aa17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 UPF3BQ9BZI7 483 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 MCM3APO60318 1980 aa17.79■□□□□ 0.44
PRPF40B-211ENST00000551063 hCG_1984214I3L0E3 225 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 PIK3CDO00329 1044 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 C6orf222P0C671 652 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 DUSP28Q4G0W2 176 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 CCSAPQ6IQ19 270 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 PPP1R18Q6NYC8 613 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 NOL8Q76FK4 1167 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 TLK2Q86UE8 772 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 TEX2Q8IWB9 1127 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 ZNF713Q8N859 430 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 SCFD2Q8WU76 684 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
PRPF40B-211ENST00000551063 MYADML2A6NDP7 307 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 NKRFO15226 690 aaKnown RBP eCLIP17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 NR3C2P08235 984 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 BMP8BP34820 402 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 SNX17Q15036 470 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 STXBP2Q15833 593 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 PCSK9Q8NBP7 692 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 CUL5Q93034 780 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 WDR11Q9BZH6 1224 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 AP5M1Q9H0R1 490 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
PRPF40B-211ENST00000551063 MYH6P13533 1939 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 FRMPD4Q14CM0 1322 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 hCG_1642624A0A1W2PR95 340 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 CTAGE5O15320 804 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 TTLL4Q14679 1199 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 LRRC26Q2I0M4 334 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 C1orf53Q5VUE5 145 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 HEATR3Q7Z4Q2 680 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 GDF15Q99988 308 aa17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-211ENST00000551063 A0A1W2PQ45 241 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 A0A1W2PQY0 241 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 ACLYP53396 1101 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 PGM5Q15124 567 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 WWC2Q6AWC2 1192 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 SMARCC2Q8TAQ2 1214 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 ZNF274Q96GC6 653 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 ALDH8A1Q9H2A2 487 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 PSTPIP2Q9H939 334 aa17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 V9GY48 417 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-211ENST00000551063 MEIS2O14770 477 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 ZEB2O60315 1214 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 SEC24BO95487 1268 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 CCND2P30279 289 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 ATN1P54259 1190 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 KCNA10Q16322 511 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 FSCN1Q16658 493 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 GNASQ5JWF2 1037 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 SLC39A5Q6ZMH5 540 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 VSIG10LQ86VR7 867 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 FERMT2Q96AC1 680 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 GLT1D1Q96MS3 346 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 STARD7Q9NQZ5 370 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
PRPF40B-211ENST00000551063 ALPK3Q96L96 1907 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 IFNAR1P17181 557 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 SYN1P17600 705 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 NAPAP54920 295 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 RTP1P59025 263 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 NTRK3Q16288 839 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 PFKFB3Q16875 520 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 TMEM63BQ5T3F8 832 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms