RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 USP17L24Q0WX57 530 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 UBE2SQ16763 222 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 CT47A1Q5JQC4 288 aaPredicted RBP14.21□□□□□ -0.13
CACNB3-217ENST00000550483 CST9Q5W186 159 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 CCDC174Q6PII3 467 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 ERO1BQ86YB8 467 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 PROCA1Q8NCQ7 364 aaPredicted RBP14.21□□□□□ -0.13
CACNB3-217ENST00000550483 CRYGNQ8WXF5 182 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 MTMR9Q96QG7 549 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 BPIFA3Q9BQP9 254 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 HOXC10Q9NYD6 342 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 SNCAIPQ9Y6H5 919 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 CASP8AP2Q9UKL3 1982 aa14.21□□□□□ -0.13
CACNB3-217ENST00000550483 ADM5C9JUS6 153 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 ACTN4O43707 911 aaKnown RBP14.2□□□□□ -0.14
CACNB3-217ENST00000550483 MARCH6O60337 910 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 HOXA7P31268 230 aaPredicted RBP14.2□□□□□ -0.14
CACNB3-217ENST00000550483 FKBP1BP68106 108 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 ARHGAP4P98171 946 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 GRIN1Q05586 938 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 VGLL4Q14135 290 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 COG2Q14746 738 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 POSTNQ15063 836 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 LONRF3Q496Y0 759 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 Q4G0T1 1027 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 PRAMEF18Q5VWM3 479 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 USP17L6PQ6QN14 398 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.2□□□□□ -0.14
CACNB3-217ENST00000550483 KCTD17Q8N5Z5 321 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 MB21D1Q8N884 522 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 IGSF22Q8N9C0 903 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 FAM20AQ96MK3 541 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.2□□□□□ -0.14
CACNB3-217ENST00000550483 ADAMTS5Q9UNA0 930 aa14.2□□□□□ -0.14
CACNB3-217ENST00000550483 PAPPA2Q9BXP8 1791 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 SPDYE5A6NIY4 337 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 DSG3P32926 999 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 HSD17B4P51659 736 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 NLRP12P59046 1061 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 SETQ01105 290 aaPredicted RBP14.19□□□□□ -0.14
CACNB3-217ENST00000550483 PABPC4Q13310 644 aaKnown RBP eCLIP14.19□□□□□ -0.14
CACNB3-217ENST00000550483 NT5DC1Q5TFE4 455 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 CATSPERGQ6ZRH7 1159 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
CACNB3-217ENST00000550483 RASSF8Q8NHQ8 419 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 CALML4Q96GE6 196 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 LRRC27Q9C0I9 530 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 TMEM60Q9H2L4 133 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 DISC1Q9NRI5 854 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 FBXO28Q9NVF7 368 aa14.19□□□□□ -0.14
CACNB3-217ENST00000550483 ZNF536O15090 1300 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 KDM3AQ9Y4C1 1321 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 VWA5AO00534 786 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 OPLAHO14841 1288 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 CFBP00751 764 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 COPB2P35606 906 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 STAT6P42226 847 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 ZNF165P49910 485 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 HMGCS2P54868 508 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 TPM4P67936 248 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 PPIL2Q13356 520 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 ANO6Q4KMQ2 910 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 RRAGBQ5VZM2 374 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 XRRA1Q6P2D8 792 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 ERMNQ8TAM6 284 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 SMARCE1Q969G3 411 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 DHX58Q96C10 678 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 GSDMAQ96QA5 445 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 RMND1Q9NWS8 449 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 STK17AQ9UEE5 414 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 SERTAD1Q9UHV2 236 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 KCNH4Q9UQ05 1017 aa14.18□□□□□ -0.14
CACNB3-217ENST00000550483 TDP2O95551 362 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 SNAP25P60880 206 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 MDM2Q00987 491 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-217ENST00000550483 AMPD3Q01432 767 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 TTLL12Q14166 644 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-217ENST00000550483 E2F4Q16254 413 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 IL17AQ16552 155 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 SPECC1Q5M775 1068 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 KRT79Q5XKE5 535 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 HAUS3Q68CZ6 603 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 NIPA1Q7RTP0 329 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 SH3RF1Q7Z6J0 888 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 CABP7Q86V35 215 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 SPATA20Q8TB22 786 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 GTF3C2Q8WUA4 911 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-217ENST00000550483 NT5C3AQ9H0P0 336 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 KCNMB3Q9NPA1 279 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 LRWD1Q9UFC0 647 aa14.17□□□□□ -0.14
CACNB3-217ENST00000550483 PHIPQ8WWQ0 1821 aa14.16□□□□□ -0.14
CACNB3-217ENST00000550483 A0A0G2JLL6 359 aaPredicted RBP14.16□□□□□ -0.14
CACNB3-217ENST00000550483 SMTNL1A8MU46 457 aa14.16□□□□□ -0.14
CACNB3-217ENST00000550483 GOLGA6L19H0YKK7 550 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms