RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 PXMP2Q9NR77 195 aa20.12■□□□□ 0.81
CDK4-207ENST00000550419 STXBP3O00186 592 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 CDKL5O76039 1030 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 HOXA13P31271 388 aaPredicted RBP20.11■□□□□ 0.81
CDK4-207ENST00000550419 SCRN1Q12765 414 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 STK3Q13188 491 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 CCDC144BQ3MJ40 725 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 ARHGEF16Q5VV41 709 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 UBE2Q1Q7Z7E8 422 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 TRIM22Q8IYM9 498 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 GPKOWQ92917 476 aaPredicted RBP eCLIP20.11■□□□□ 0.81
CDK4-207ENST00000550419 PHKBQ93100 1093 aa20.11■□□□□ 0.81
CDK4-207ENST00000550419 ZHX1Q9UKY1 873 aaPredicted RBP20.11■□□□□ 0.81
CDK4-207ENST00000550419 LRRC37A2A6NM11 1700 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 FRMPD4Q14CM0 1322 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 RBM47A0AV96 593 aaKnown RBP20.1■□□□□ 0.81
CDK4-207ENST00000550419 ESYT2A0FGR8 921 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 RARBP10826 455 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 NAPAP54920 295 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 ME3Q16798 604 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 IQSEC1Q6DN90 963 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 TYW1BQ6NUM6 668 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 TAPT1Q6NXT6 567 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 FAM177A1Q8N128 213 aaPredicted RBP20.1■□□□□ 0.81
CDK4-207ENST00000550419 CCDC12Q8WUD4 166 aaPredicted RBP20.1■□□□□ 0.81
CDK4-207ENST00000550419 PDCD2LQ9BRP1 358 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 RIC8AQ9NPQ8 531 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
CDK4-207ENST00000550419 MCM3APO60318 1980 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 DUSP11O75319 330 aaKnown RBP20.09■□□□□ 0.81
CDK4-207ENST00000550419 NR3C2P08235 984 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 SSRP1Q08945 709 aaKnown RBP20.09■□□□□ 0.81
CDK4-207ENST00000550419 STXBP2Q15833 593 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 USP17L6PQ6QN14 398 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 ARRDC4Q8NCT1 418 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 SMARCC2Q8TAQ2 1214 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 GTF3C6Q969F1 213 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 SLC26A6Q9BXS9 759 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 SH3GLB2Q9NR46 395 aa20.09■□□□□ 0.81
CDK4-207ENST00000550419 STK36Q9NRP7 1315 aa20.08■□□□□ 0.81
CDK4-207ENST00000550419 EIF3JO75822 258 aaKnown RBP20.08■□□□□ 0.81
CDK4-207ENST00000550419 DEXIO95424 95 aa20.08■□□□□ 0.81
CDK4-207ENST00000550419 NKX3-2P78367 333 aa20.08■□□□□ 0.81
CDK4-207ENST00000550419 VSIG10LQ86VR7 867 aa20.08■□□□□ 0.81
CDK4-207ENST00000550419 ZMYND12Q9H0C1 365 aa20.08■□□□□ 0.81
CDK4-207ENST00000550419 DDX49Q9Y6V7 483 aaKnown RBP20.08■□□□□ 0.81
CDK4-207ENST00000550419 FRMPD3Q5JV73 1810 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 SMCO2A6NFE2 343 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 DNM1LO00429 736 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 STAM2O75886 525 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 FARP2O94887 1054 aaPredicted RBP20.07■□□□□ 0.8
CDK4-207ENST00000550419 EIF2AK2P19525 551 aaKnown RBP20.07■□□□□ 0.8
CDK4-207ENST00000550419 MNX1P50219 401 aaPredicted RBP20.07■□□□□ 0.8
CDK4-207ENST00000550419 MLLT1Q03111 559 aaPredicted RBP20.07■□□□□ 0.8
CDK4-207ENST00000550419 TNFAIP2Q03169 654 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 PGM5Q15124 567 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 MCTP2Q6DN12 878 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 XRRA1Q6P2D8 792 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 FCHSD1Q86WN1 690 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 FBXO16Q8IX29 292 aaPredicted RBP20.07■□□□□ 0.8
CDK4-207ENST00000550419 CCDC148Q8NFR7 591 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 SCFD2Q8WU76 684 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 ZSCAN31Q96LW9 406 aaPredicted RBP20.07■□□□□ 0.8
CDK4-207ENST00000550419 XPNPEP3Q9NQH7 507 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 Q9Y3F1 56 aa20.07■□□□□ 0.8
CDK4-207ENST00000550419 ST18O60284 1047 aa20.06■□□□□ 0.8
CDK4-207ENST00000550419 FOSP01100 380 aaPredicted RBP20.06■□□□□ 0.8
CDK4-207ENST00000550419 ADCYAP1R1P41586 468 aa20.06■□□□□ 0.8
CDK4-207ENST00000550419 ADCY7P51828 1080 aa20.06■□□□□ 0.8
CDK4-207ENST00000550419 EEPD1Q7L9B9 569 aa20.06■□□□□ 0.8
CDK4-207ENST00000550419 UPF3AQ9H1J1 476 aaKnown RBP20.06■□□□□ 0.8
CDK4-207ENST00000550419 PDGFCQ9NRA1 345 aa20.06■□□□□ 0.8
CDK4-207ENST00000550419 GNEQ9Y223 722 aaKnown RBP20.06■□□□□ 0.8
CDK4-207ENST00000550419 SPDYE3A6NKU9 549 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 NKRFO15226 690 aaKnown RBP eCLIP20.05■□□□□ 0.8
CDK4-207ENST00000550419 ADCY6O43306 1168 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 ADAMTS4O75173 837 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 LARGE1O95461 756 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 CTDNEP1O95476 244 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 COL6A1P12109 1028 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 GNA11P29992 359 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 CCND2P30279 289 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 CLK2P49760 499 aaKnown RBP20.05■□□□□ 0.8
CDK4-207ENST00000550419 GJA9P57773 515 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 DUSP28Q4G0W2 176 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 ANO1Q5XXA6 986 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 PCNX4Q63HM2 1172 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 RNF180Q86T96 592 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 WDR11Q9BZH6 1224 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 C6orf50Q9HD87 102 aa20.05■□□□□ 0.8
CDK4-207ENST00000550419 SH2B1Q9NRF2 756 aaPredicted RBP20.05■□□□□ 0.8
CDK4-207ENST00000550419 SYNRGQ9UMZ2 1314 aa20.04■□□□□ 0.8
CDK4-207ENST00000550419 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.04■□□□□ 0.8
CDK4-207ENST00000550419 SMPD1P17405 629 aa20.04■□□□□ 0.8
CDK4-207ENST00000550419 CST5P28325 142 aaPredicted RBP20.04■□□□□ 0.8
CDK4-207ENST00000550419 AP3B2Q13367 1082 aa20.04■□□□□ 0.8
CDK4-207ENST00000550419 LRRC41Q15345 812 aa20.04■□□□□ 0.8
CDK4-207ENST00000550419 NOL8Q76FK4 1167 aaKnown RBP20.04■□□□□ 0.8
CDK4-207ENST00000550419 NECAB2Q7Z6G3 386 aa20.04■□□□□ 0.8
CDK4-207ENST00000550419 NECAB1Q8N987 351 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms