RNA–Protein interactions for RNA: ENST00000550367.1

TUBA1B-206, Transcript of tubulin alpha 1b, humanhuman

TSL 3

Gene TUBA1B, Length 835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-206ENST00000550367 CCDC96Q2M329 555 aa11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 GDF6Q6KF10 455 aaPredicted RBP11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 NFRKBQ6P4R8 1299 aa11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 FAM178BQ8IXR5 827 aa11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 GJD3Q8N144 294 aa11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 UIMC1Q96RL1 719 aa11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 ZBED2Q9BTP6 218 aa11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 RANBP17Q9H2T7 1088 aaKnown RBP11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 ADD3Q9UEY8 706 aaKnown RBP11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 NOD1Q9Y239 953 aa11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 FRMPD2Q68DX3 1309 aaPredicted RBP11.35□□□□□ -0.59
TUBA1B-206ENST00000550367 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 A6NJR5 290 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 GNAT2P19087 354 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 BFSP2Q13515 415 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 CLEC4DQ8WXI8 215 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 DHX38Q92620 1227 aaKnown RBP11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 ANKS1AQ92625 1134 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 NAPBQ9H115 298 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
TUBA1B-206ENST00000550367 LINC01553A4QN01 128 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 TSPY2A6NKD2 308 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 PRR33A8MZF0 331 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 FOXP2O15409 715 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 NBNO60934 754 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 BAIAP3O94812 1187 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 TXNP10599 105 aaKnown RBP11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 SSTR3P32745 418 aaPredicted RBP11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 PDE4DQ08499 809 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 SYDE2Q5VT97 1194 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 RNF207Q6ZRF8 634 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 AFG1LQ8WV93 481 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 C17orf80Q9BSJ5 609 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 WDFY4Q6ZS81 3184 aa11.33□□□□□ -0.6
TUBA1B-206ENST00000550367 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 GJB5O95377 273 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 SLC3A2P08195 630 aaKnown RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 MRE11P49959 708 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 ERVK-21P61565 698 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 LEXMQ3ZCV2 418 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.32□□□□□ -0.62e-7■■■■■ 27.9
TUBA1B-206ENST00000550367 LRRC8DQ7L1W4 858 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 CHST3Q7LGC8 479 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 SCFD2Q8WU76 684 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 KAT2BQ92831 832 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 WNT8BQ93098 351 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 TGS1Q96RS0 853 aaKnown RBP11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 NACAP1Q9BZK3 213 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 LMCD1Q9NZU5 365 aa11.32□□□□□ -0.6
TUBA1B-206ENST00000550367 KPNA6O60684 536 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 ZFYP08048 801 aaPredicted RBP11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 MMP3P08254 477 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 CKBP12277 381 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 SELPP16109 830 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 EDNRBP24530 442 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 MBTPS1Q14703 1052 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 C20orf194Q5TEA3 1177 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 CNKSR3Q6P9H4 555 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 BTNL9Q6UXG8 535 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 AFAP1L1Q8TED9 768 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 TBC1D5Q92609 795 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 RAD9AQ99638 391 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 CPVLQ9H3G5 476 aa11.31□□□□□ -0.6
TUBA1B-206ENST00000550367 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 NKRFO15226 690 aaKnown RBP eCLIP11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 CXCL10P02778 98 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 MS4A1P11836 297 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 NOVP48745 357 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 ZNF200P98182 395 aaPredicted RBP11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 HIC1Q14526 733 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 LRRFIP1Q32MZ4 808 aaKnown RBP11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 CCDC62Q6P9F0 684 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 SEPT14Q6ZU15 432 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 OTUD7AQ8TE49 926 aaPredicted RBP11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 FBXL18Q96ME1 805 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 CRBNQ96SW2 442 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 RAD50Q92878 1312 aa11.3□□□□□ -0.6
TUBA1B-206ENST00000550367 NHLH1Q02575 133 aa11.29□□□□□ -0.6
TUBA1B-206ENST00000550367 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
TUBA1B-206ENST00000550367 USH1GQ495M9 461 aa11.29□□□□□ -0.6
TUBA1B-206ENST00000550367 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
TUBA1B-206ENST00000550367 ZNF618Q5T7W0 954 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms