RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 IL25Q9H293 177 aa12.65□□□□□ -0.38
VTI1BP3-201ENST00000550220 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
VTI1BP3-201ENST00000550220 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
VTI1BP3-201ENST00000550220 HIPK3Q9H422 1215 aa12.65□□□□□ -0.38
VTI1BP3-201ENST00000550220 IL23AQ9NPF7 189 aa12.65□□□□□ -0.38
VTI1BP3-201ENST00000550220 DDX49Q9Y6V7 483 aaKnown RBP12.65□□□□□ -0.38
VTI1BP3-201ENST00000550220 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 E7EWF7 191 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 MYL3P08590 195 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 CSF2RAP15509 400 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 IRX6P78412 446 aaPredicted RBP12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 PTH1RQ03431 593 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 GRM4Q14833 912 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 TAAR1Q96RJ0 339 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 MAP3K14Q99558 947 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 PPP1R12CQ9BZL4 782 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 ALDH8A1Q9H2A2 487 aaPredicted RBP12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 MAD2L2Q9UI95 211 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 PCDHA1Q9Y5I3 950 aa12.64□□□□□ -0.39
VTI1BP3-201ENST00000550220 B4GALT4O60513 344 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 CFBP00751 764 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 GH1P01241 217 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 FGBP02675 491 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 PFKMP08237 780 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 SMARCA1P28370 1054 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 KIF5BP33176 963 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 CYP2C18P33260 490 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 HSD17B4P51659 736 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 PSMC6P62333 389 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 TMEM240Q5SV17 173 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 CCDC62Q6P9F0 684 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 STAG2Q8N3U4 1231 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 HERVK_113Q902F9 699 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 TBC1D5Q92609 795 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 GUCD1Q96NT3 240 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 NOC4LQ9BVI4 516 aaKnown RBP12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 RIOX1Q9H6W3 641 aa12.63□□□□□ -0.39
VTI1BP3-201ENST00000550220 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 NR3C2P08235 984 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 TGFB3P10600 412 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 GNAQP50148 359 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 TROAPQ12815 778 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 LAMC2Q13753 1193 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 RASIP1Q5U651 963 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 STOX1Q6ZVD7 989 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 ZNF365Q70YC5 407 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 C16orf59Q7L2K0 433 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 EMID1Q96A84 441 aaPredicted RBP12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 CDX2Q99626 313 aaPredicted RBP12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 TRPV6Q9H1D0 765 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 PXMP2Q9NR77 195 aa12.62□□□□□ -0.39
VTI1BP3-201ENST00000550220 GCOM1H8Y6P7 765 aaPredicted RBP12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 DDAH1O94760 285 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 POLR2MP0CAP2 368 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 MCM5P33992 734 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 RFC2P35250 354 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 BFSP2Q13515 415 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 RAB30Q15771 203 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 DGKDQ16760 1214 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 FAM47CQ5HY64 1035 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 RETREG2Q8NC44 543 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 IGDCC4Q8TDY8 1250 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 COL20A1Q9P218 1284 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 MSRAQ9UJ68 235 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 DDX41Q9UJV9 622 aaKnown RBP12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 NOD1Q9Y239 953 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 MCM3APO60318 1980 aa12.61□□□□□ -0.39
VTI1BP3-201ENST00000550220 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 STAM2O75886 525 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 ARIH2O95376 493 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 CALM1P0DP23 149 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 CALM2P0DP24 149 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 CALM3P0DP25 149 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 ACRP10323 421 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 EIF2AK2P19525 551 aaKnown RBP12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 PTGS1P23219 599 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 DNAJB2P25686 324 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 RNF20Q5VTR2 975 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 CENPQQ7L2Z9 268 aaPredicted RBP12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 SESTD1Q86VW0 696 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
VTI1BP3-201ENST00000550220 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms