RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 C19orf47Q8N9M1 422 aaKnown RBP7.2□□□□□ -1.26
CCDC38-208ENST00000549876 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
CCDC38-208ENST00000549876 RCC1LQ96I51 464 aaKnown RBP7.2□□□□□ -1.26
CCDC38-208ENST00000549876 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC38-208ENST00000549876 PCDHB10Q9UN67 800 aa7.2□□□□□ -1.26
CCDC38-208ENST00000549876 PPM1BO75688 479 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 PAMP19021 973 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 AMPD2Q01433 879 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 SMAD4Q13485 552 aaKnown RBP7.19□□□□□ -1.26
CCDC38-208ENST00000549876 CCDC81Q6ZN84 652 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 KLHL6Q8WZ60 621 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 FGD4Q96M96 766 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 GORASP1Q9BQQ3 440 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 C1QTNF3Q9BXJ4 246 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 GINM1Q9NU53 330 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 SIT1Q9Y3P8 196 aa7.19□□□□□ -1.26
CCDC38-208ENST00000549876 TRBV23OR9-2A0A075B6M9 112 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 NPHP3-ACAD11A0A0J9YXS1 232 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 A0A1W2PQH9 124 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 C1QTNF3-AMACRE9PGA6 284 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 MATN3O15232 486 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 PLATP00750 562 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 NTRK1P04629 796 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 GIPRP48546 466 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 SLC7A5Q01650 507 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 PAK2Q13177 524 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 TBC1D10BQ4KMP7 808 aaPredicted RBP7.18□□□□□ -1.26
CCDC38-208ENST00000549876 ADAT2Q7Z6V5 191 aaKnown RBP7.18□□□□□ -1.26
CCDC38-208ENST00000549876 ZNF654Q8IZM8 581 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 TTC9BQ8N6N2 239 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 ZNF513Q8N8E2 541 aaPredicted RBP7.18□□□□□ -1.26
CCDC38-208ENST00000549876 SAMD11Q96NU1 681 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 CRBNQ96SW2 442 aa7.18□□□□□ -1.26
CCDC38-208ENST00000549876 C11orf84Q9BUA3 381 aaPredicted RBP7.18□□□□□ -1.26
CCDC38-208ENST00000549876 SMARCA5O60264 1052 aaPredicted RBP7.17□□□□□ -1.26
CCDC38-208ENST00000549876 NPHS1O60500 1241 aa7.17□□□□□ -1.26
CCDC38-208ENST00000549876 CYP2C8P10632 490 aa7.17□□□□□ -1.26
CCDC38-208ENST00000549876 RPL13P26373 211 aaKnown RBP7.17□□□□□ -1.26
CCDC38-208ENST00000549876 THBS2P35442 1172 aa7.17□□□□□ -1.26
CCDC38-208ENST00000549876 SOX9P48436 509 aa7.17□□□□□ -1.26
CCDC38-208ENST00000549876 CPZQ66K79 652 aa7.17□□□□□ -1.26
CCDC38-208ENST00000549876 PLEKHO2Q8TD55 490 aa7.17□□□□□ -1.26
CCDC38-208ENST00000549876 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
CCDC38-208ENST00000549876 SYT3Q9BQG1 590 aa7.17□□□□□ -1.26
CCDC38-208ENST00000549876 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
CCDC38-208ENST00000549876 AKAP8O43823 692 aaKnown RBP7.16□□□□□ -1.26
CCDC38-208ENST00000549876 FUCA1P04066 466 aa7.16□□□□□ -1.26
CCDC38-208ENST00000549876 EIF6P56537 245 aaKnown RBP7.16□□□□□ -1.26
CCDC38-208ENST00000549876 ZXDAP98168 799 aa7.16□□□□□ -1.26
CCDC38-208ENST00000549876 HDLBPQ00341 1268 aaKnown RBP7.16□□□□□ -1.26
CCDC38-208ENST00000549876 MBLAC2Q68D91 279 aa7.16□□□□□ -1.26
CCDC38-208ENST00000549876 USP33Q8TEY7 942 aa7.16□□□□□ -1.26
CCDC38-208ENST00000549876 DPF3Q92784 378 aa7.16□□□□□ -1.26
CCDC38-208ENST00000549876 SSBP3Q9BWW4 388 aaPredicted RBP7.16□□□□□ -1.26
CCDC38-208ENST00000549876 PCDH18Q9HCL0 1135 aa7.16□□□□□ -1.26
CCDC38-208ENST00000549876 UNCXA6NJT0 531 aa7.15□□□□□ -1.26
CCDC38-208ENST00000549876 RBM10P98175 930 aaKnown RBP7.15□□□□□ -1.26
CCDC38-208ENST00000549876 RGL3Q3MIN7 710 aa7.15□□□□□ -1.26
CCDC38-208ENST00000549876 FAM26FQ5R3K3 315 aa7.15□□□□□ -1.26
CCDC38-208ENST00000549876 MIB1Q86YT6 1006 aa7.15□□□□□ -1.26
CCDC38-208ENST00000549876 KYQ8NBH2 561 aa7.15□□□□□ -1.26
CCDC38-208ENST00000549876 COPS5Q92905 334 aa7.15□□□□□ -1.26
CCDC38-208ENST00000549876 MMP19Q99542 508 aa7.15□□□□□ -1.26
CCDC38-208ENST00000549876 ZNF20P17024 532 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 C9orf131Q5VYM1 1079 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 ETV3LQ6ZN32 361 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 NT5DC4Q86YG4 428 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 DCP2Q8IU60 420 aaKnown RBP7.14□□□□□ -1.27
CCDC38-208ENST00000549876 FAM26EQ8N5C1 309 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 OR6P1Q8NGX9 317 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 RASGRP4Q8TDF6 673 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 C8orf49Q96NF6 230 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 CLEC1BQ9P126 229 aa7.14□□□□□ -1.27
CCDC38-208ENST00000549876 SGSM2O43147 1006 aa7.13□□□□□ -1.27
CCDC38-208ENST00000549876 KIAA2012Q0VF49 1180 aa7.13□□□□□ -1.27
CCDC38-208ENST00000549876 LOXL4Q96JB6 756 aa7.13□□□□□ -1.27
CCDC38-208ENST00000549876 SPATA32Q96LK8 384 aa7.13□□□□□ -1.27
CCDC38-208ENST00000549876 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
CCDC38-208ENST00000549876 EFR3BQ9Y2G0 817 aa7.13□□□□□ -1.27
CCDC38-208ENST00000549876 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.13□□□□□ -1.27
CCDC38-208ENST00000549876 MROH6A6NGR9 719 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 PLS3P13797 630 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 LGI4Q8N135 537 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 TTLL6Q8N841 843 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 GPRASP2Q96D09 838 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 MARCH2Q9P0N8 246 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 APEX2Q9UBZ4 518 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 AKT3Q9Y243 479 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 SUGT1Q9Y2Z0 365 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 EMC9Q9Y3B6 208 aa7.12□□□□□ -1.27
CCDC38-208ENST00000549876 ANKRD34BA5PLL1 514 aa7.11□□□□□ -1.27
CCDC38-208ENST00000549876 GJA8P48165 433 aa7.11□□□□□ -1.27
CCDC38-208ENST00000549876 ITGA1P56199 1179 aa7.11□□□□□ -1.27
CCDC38-208ENST00000549876 SCRN1Q12765 414 aa7.11□□□□□ -1.27
CCDC38-208ENST00000549876 CD300LDQ6UXZ3 194 aa7.11□□□□□ -1.27
CCDC38-208ENST00000549876 AP5M1Q9H0R1 490 aa7.11□□□□□ -1.27
CCDC38-208ENST00000549876 GPRC5CQ9NQ84 441 aa7.11□□□□□ -1.27
CCDC38-208ENST00000549876 KCNH1O95259 989 aa7.1□□□□□ -1.27
CCDC38-208ENST00000549876 SLC6A11P48066 632 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms