RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 PCDHA1Q9Y5I3 950 aa28.04■■■□□ 2.08
USP44-205ENST00000549639 KPNA6O60684 536 aa28.03■■■□□ 2.08
USP44-205ENST00000549639 CD4P01730 458 aa28.03■■■□□ 2.08
USP44-205ENST00000549639 TXNP10599 105 aaKnown RBP28.03■■■□□ 2.08
USP44-205ENST00000549639 MCM5P33992 734 aa28.03■■■□□ 2.08
USP44-205ENST00000549639 HSD17B4P51659 736 aa28.03■■■□□ 2.08
USP44-205ENST00000549639 FAM109BQ6ICB4 259 aaPredicted RBP28.03■■■□□ 2.08
USP44-205ENST00000549639 MFSD5Q6N075 450 aa28.03■■■□□ 2.08
USP44-205ENST00000549639 DEFB123Q8N688 67 aa28.03■■■□□ 2.08
USP44-205ENST00000549639 GPHNQ9NQX3 736 aaPredicted RBP28.03■■■□□ 2.08
USP44-205ENST00000549639 CFBP00751 764 aa28.02■■■□□ 2.08
USP44-205ENST00000549639 C9orf50Q5SZB4 431 aa28.02■■■□□ 2.08
USP44-205ENST00000549639 ARHGEF16Q5VV41 709 aa28.02■■■□□ 2.08
USP44-205ENST00000549639 TMEM87BQ96K49 555 aa28.02■■■□□ 2.08
USP44-205ENST00000549639 SENP2Q9HC62 589 aa28.02■■■□□ 2.08
USP44-205ENST00000549639 COL20A1Q9P218 1284 aa28.02■■■□□ 2.08
USP44-205ENST00000549639 PNMA6FA0A0J9YX94 578 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 A6NJR5 290 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 DDAH1O94760 285 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 PTGS1P23219 599 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 KIF5BP33176 963 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 NECTIN1Q15223 517 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 TMEM199Q8N511 208 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 ANO2Q9NQ90 1003 aa28.01■■■□□ 2.07
USP44-205ENST00000549639 SLC27A2O14975 620 aa28■■■□□ 2.07
USP44-205ENST00000549639 PRC1O43663 620 aa28■■■□□ 2.07
USP44-205ENST00000549639 PPP1R11O60927 126 aaPredicted RBP28■■■□□ 2.07
USP44-205ENST00000549639 EIF3JO75822 258 aaKnown RBP28■■■□□ 2.07
USP44-205ENST00000549639 SMARCA1P28370 1054 aa28■■■□□ 2.07
USP44-205ENST00000549639 PURAQ00577 322 aaKnown RBP28■■■□□ 2.07
USP44-205ENST00000549639 PPIGQ13427 754 aaKnown RBP eCLIP28■■■□□ 2.07
USP44-205ENST00000549639 RNF20Q5VTR2 975 aa28■■■□□ 2.07
USP44-205ENST00000549639 HOMER1Q86YM7 354 aa28■■■□□ 2.07
USP44-205ENST00000549639 CTCFLQ8NI51 663 aaPredicted RBP28■■■□□ 2.07
USP44-205ENST00000549639 PIGSQ96S52 555 aa28■■■□□ 2.07
USP44-205ENST00000549639 MTG1Q9BT17 334 aaPredicted RBP28■■■□□ 2.07
USP44-205ENST00000549639 LY9Q9HBG7 655 aa28■■■□□ 2.07
USP44-205ENST00000549639 PXMP2Q9NR77 195 aa28■■■□□ 2.07
USP44-205ENST00000549639 GRIN2DO15399 1336 aa27.99■■■□□ 2.07
USP44-205ENST00000549639 OPLAHO14841 1288 aa27.99■■■□□ 2.07
USP44-205ENST00000549639 CREB3L3Q68CJ9 461 aa27.99■■■□□ 2.07
USP44-205ENST00000549639 CCDC62Q6P9F0 684 aa27.99■■■□□ 2.07
USP44-205ENST00000549639 ZNF654Q8IZM8 581 aa27.99■■■□□ 2.07
USP44-205ENST00000549639 LZTS2Q9BRK4 669 aa27.99■■■□□ 2.07
USP44-205ENST00000549639 CYTH3O43739 400 aa27.98■■■□□ 2.07
USP44-205ENST00000549639 NR3C2P08235 984 aa27.98■■■□□ 2.07
USP44-205ENST00000549639 MYL3P08590 195 aa27.98■■■□□ 2.07
USP44-205ENST00000549639 LIFRP42702 1097 aa27.98■■■□□ 2.07
USP44-205ENST00000549639 SMAD3P84022 425 aaKnown RBP27.98■■■□□ 2.07
USP44-205ENST00000549639 RNPC3Q96LT9 517 aaKnown RBP27.98■■■□□ 2.07
USP44-205ENST00000549639 SUPT20HL2P0C7V6 817 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 CALM1P0DP23 149 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 CALM2P0DP24 149 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 CALM3P0DP25 149 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 EIF2AK2P19525 551 aaKnown RBP27.97■■■□□ 2.07
USP44-205ENST00000549639 GNAQP50148 359 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 EPHB4P54760 987 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 PSMC6P62333 389 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 SLC35G1Q2M3R5 365 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 SPZ1Q9BXG8 430 aa27.97■■■□□ 2.07
USP44-205ENST00000549639 CCDC69A6NI79 296 aa27.96■■■□□ 2.07
USP44-205ENST00000549639 GCOM1H8Y6P7 765 aaPredicted RBP27.96■■■□□ 2.07
USP44-205ENST00000549639 SH2B2O14492 632 aaPredicted RBP27.96■■■□□ 2.07
USP44-205ENST00000549639 GH1P01241 217 aa27.96■■■□□ 2.07
USP44-205ENST00000549639 POLR2MP0CAP2 368 aa27.96■■■□□ 2.07
USP44-205ENST00000549639 NFXL1Q6ZNB6 911 aa27.96■■■□□ 2.07
USP44-205ENST00000549639 SEPT14Q6ZU15 432 aa27.96■■■□□ 2.07
USP44-205ENST00000549639 MTMR10Q9NXD2 777 aa27.96■■■□□ 2.07
USP44-205ENST00000549639 LAMA2P24043 3122 aaKnown RBP27.96■■■□□ 2.07
USP44-205ENST00000549639 ARIH2O95376 493 aa27.95■■■□□ 2.06
USP44-205ENST00000549639 KCNV1Q6PIU1 500 aa27.95■■■□□ 2.06
USP44-205ENST00000549639 COPS5Q92905 334 aa27.95■■■□□ 2.06
USP44-205ENST00000549639 PDCD2LQ9BRP1 358 aa27.95■■■□□ 2.06
USP44-205ENST00000549639 PPP1R12CQ9BZL4 782 aa27.95■■■□□ 2.06
USP44-205ENST00000549639 ALDH8A1Q9H2A2 487 aaPredicted RBP27.95■■■□□ 2.06
USP44-205ENST00000549639 HIPK3Q9H422 1215 aa27.95■■■□□ 2.06
USP44-205ENST00000549639 B4GALT4O60513 344 aa27.94■■■□□ 2.06
USP44-205ENST00000549639 CDC45O75419 566 aa27.94■■■□□ 2.06
USP44-205ENST00000549639 PTPN11Q06124 597 aaPredicted RBP27.94■■■□□ 2.06
USP44-205ENST00000549639 NFRKBQ6P4R8 1299 aa27.94■■■□□ 2.06
USP44-205ENST00000549639 Q7L0L9 218 aa27.94■■■□□ 2.06
USP44-205ENST00000549639 RRP36Q96EU6 259 aaKnown RBP27.94■■■□□ 2.06
USP44-205ENST00000549639 KIAA1217Q5T5P2 1943 aa27.93■■■□□ 2.06
USP44-205ENST00000549639 ZNF697Q5TEC3 545 aa27.93■■■□□ 2.06
USP44-205ENST00000549639 PSRC1Q6PGN9 363 aaPredicted RBP27.93■■■□□ 2.06
USP44-205ENST00000549639 EMID1Q96A84 441 aaPredicted RBP27.93■■■□□ 2.06
USP44-205ENST00000549639 CCDC136Q96JN2 1154 aa27.93■■■□□ 2.06
USP44-205ENST00000549639 TRPV6Q9H1D0 765 aa27.93■■■□□ 2.06
USP44-205ENST00000549639 DDX41Q9UJV9 622 aaKnown RBP27.93■■■□□ 2.06
USP44-205ENST00000549639 BAZ2BQ9UIF8 2168 aaKnown RBP27.93■■■□□ 2.06
USP44-205ENST00000549639 SCN10AQ9Y5Y9 1956 aa27.92■■■□□ 2.06
USP44-205ENST00000549639 CSF2RAP15509 400 aa27.92■■■□□ 2.06
USP44-205ENST00000549639 HOXA13P31271 388 aaPredicted RBP27.92■■■□□ 2.06
USP44-205ENST00000549639 LY6KQ17RY6 165 aa27.92■■■□□ 2.06
USP44-205ENST00000549639 VSIG10LQ86VR7 867 aa27.92■■■□□ 2.06
USP44-205ENST00000549639 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.92■■■□□ 2.06
USP44-205ENST00000549639 NOC4LQ9BVI4 516 aaKnown RBP27.92■■■□□ 2.06
USP44-205ENST00000549639 SEC63Q9UGP8 760 aaKnown RBP27.92■■■□□ 2.06
USP44-205ENST00000549639 STXBP5LQ9Y2K9 1186 aa27.92■■■□□ 2.06
USP44-205ENST00000549639 MRVI1Q9Y6F6 885 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms