RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 TGS1Q96RS0 853 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 RAD9AQ99638 391 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 EPB41L4AQ9HCS5 686 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 GRXCR2A6NFK2 248 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 A6NJR5 290 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 PLA2G6O60733 806 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 ERVK-21P61565 698 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 COPS5Q92905 334 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 SNX27Q96L92 541 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 CRBNQ96SW2 442 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 STX8Q9UNK0 236 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 RAD50Q92878 1312 aa12.81□□□□□ -0.36
TRAFD1-206ENST00000549358 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 PTPDC1A2A3K4 754 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 PATL2C9JE40 543 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 RBAK-RBAKDNI3L0D1 243 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 NFIBO00712 420 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 GPAA1O43292 621 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 DCXO43602 365 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 GJB5O95377 273 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 ICAM1P05362 532 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 PDE4BQ07343 736 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 PPP2R5BQ15173 497 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 RASGRP2Q7LDG7 609 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 IFNL3Q8IZI9 196 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 APPBP2Q92624 585 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 MYH4Q9Y623 1939 aa12.8□□□□□ -0.36
TRAFD1-206ENST00000549358 WDFY4Q6ZS81 3184 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 H3BQ06 376 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 NKRFO15226 690 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 RNF113AO15541 343 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 NBNO60934 754 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 TXNP10599 105 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 SELPP16109 830 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 GNAT2P19087 354 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 CALML3P27482 149 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 PDE4DQ08499 809 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 TCTN1Q2MV58 587 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 GDF6Q6KF10 455 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 CNKSR3Q6P9H4 555 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 CAGE1Q8TC20 777 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 SCFD2Q8WU76 684 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 C17orf80Q9BSJ5 609 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 KCNH6Q9H252 994 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
TRAFD1-206ENST00000549358 LOC102724159A0A0B4J2E5 919 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 ABHD14A-ACY1A0A1B0GW23 586 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 M0R2C6 588 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 NMT2O60551 498 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 SLC16A2P36021 539 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 IKBKEQ14164 716 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 PWP2Q15269 919 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 SLC30A10Q6XR72 485 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 KBTBD3Q8NAB2 608 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 NEK9Q8TD19 979 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 ANKS1AQ92625 1134 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
TRAFD1-206ENST00000549358 TSPY2A6NKD2 308 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 CXCL10P02778 98 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 CKBP12277 381 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 CCDC96Q2M329 555 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 MPHOSPH6Q99547 160 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 RANBP17Q9H2T7 1088 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 INCENPQ9NQS7 918 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 IL17RBQ9NRM6 502 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.37
TRAFD1-206ENST00000549358 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 ARIH2O95376 493 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 PARNO95453 639 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 ZFYP08048 801 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 PPARAQ07869 468 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 PTPROQ16827 1216 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 HFE2Q6ZVN8 426 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 AFG1LQ8WV93 481 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 CLEC4DQ8WXI8 215 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 MRPL38Q96DV4 380 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 LRRCC1Q9C099 1032 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 ZBTB40Q9NUA8 1239 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms