RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PSMC4P43686 418 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 CTCFP49711 727 aaPredicted RBP11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 USP11P51784 963 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 MAP2K5Q13163 448 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 BAATQ14032 418 aaPredicted RBP11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 RILPL1Q5EBL4 403 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 MUM1L1Q5H9M0 696 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 MOXD1Q6UVY6 613 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 NOSTRINQ8IVI9 506 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 SYTL5Q8TDW5 730 aaPredicted RBP11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 AIFM3Q96NN9 605 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 APBA2Q99767 749 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 EFCC1Q9HA90 598 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 CHMP5Q9NZZ3 219 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 CEP131Q9UPN4 1083 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 FRMPD4Q14CM0 1322 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 DNAJC25-GNG10A0A024R161 153 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 OPLAHO14841 1288 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 CCND2P30279 289 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 SREBF1P36956 1147 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 GUCY1B3Q02153 619 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 ARHGEF16Q5VV41 709 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 RMDN3Q96TC7 470 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 ANO3Q9BYT9 981 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 PCDHA6Q9UN73 950 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 KCNJ14Q9UNX9 436 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 MTMR6Q9Y217 621 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 PCDHA8Q9Y5H6 950 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 CEP350Q5VT06 3117 aa11.14□□□□□ -0.63
SMARCD1-206ENST00000549274 SYNGAP1Q96PV0 1343 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 M0R2N6 131 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 MAFGO15525 162 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 MORN1Q5T089 497 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 PCNX4Q63HM2 1172 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 SLC30A10Q6XR72 485 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 NIPA1Q7RTP0 329 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 NEK8Q86SG6 692 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 FCHSD1Q86WN1 690 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 ZNF396Q96N95 335 aaPredicted RBP11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 PXMP2Q9NR77 195 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 NRBP1Q9UHY1 535 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 MYH7BA7E2Y1 1941 aa11.13□□□□□ -0.63
SMARCD1-206ENST00000549274 MYH15Q9Y2K3 1946 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 BTBD18B2RXH4 712 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 LAD1O00515 517 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 BRD1O95696 1058 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 F13A1P00488 732 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 CYP3A4P08684 503 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 HOXA13P31271 388 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 ZNF76P36508 570 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 ALDH5A1P51649 535 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 FOSBP53539 338 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 ARHGAP4P98171 946 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 PDE4DQ08499 809 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 NPY5RQ15761 445 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 STXBP2Q15833 593 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 PKN2Q16513 984 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 UBE2SQ16763 222 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 CSPP1Q1MSJ5 1256 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 ZNF792Q3KQV3 632 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 NLRX1Q86UT6 975 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 ZNF296Q8WUU4 475 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 BIN2Q9UBW5 565 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 SRRDQ9UH36 339 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 CFAP45Q9UL16 551 aa11.12□□□□□ -0.63
SMARCD1-206ENST00000549274 RPTORQ8N122 1335 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 PCNTO95613 3336 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 EIF3JO75822 258 aaKnown RBP11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 DDIT3P35638 169 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 PPP4R3AQ6IN85 833 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 PIK3AP1Q6ZUJ8 805 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 CD99L2Q8TCZ2 262 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 TBCKQ8TEA7 893 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 USP6NLQ92738 828 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 MAML3Q96JK9 1138 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 PDCD2LQ9BRP1 358 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 VTA1Q9NP79 307 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 CNPY2Q9Y2B0 182 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 LCTP09848 1927 aa11.11□□□□□ -0.63
SMARCD1-206ENST00000549274 KIAA1217Q5T5P2 1943 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms