RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GEMIN8Q9NWZ8 242 aaKnown RBP15.24■□□□□ 0.03
HDAC7-228ENST00000548938 SALL4Q9UJQ4 1053 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 FLT1P17948 1338 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 CNTNAP4Q9C0A0 1308 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 NDUFAB1O14561 156 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 KRT14P02533 472 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 CYP2D6P10635 497 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 PRLRP16471 622 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 HNRNPH1P31943 449 aaKnown RBP15.24■□□□□ 0.03
HDAC7-228ENST00000548938 ASIC1P78348 528 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 TEX2Q8IWB9 1127 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 CAVIN3Q969G5 261 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 TRIM9Q9C026 710 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 MYH10P35580 1976 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 COL4A1P02462 1669 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 ZNF804BA4D1E1 1349 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-228ENST00000548938 CHRM1P11229 460 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-228ENST00000548938 PCP11498 1178 aaKnown RBP15.23■□□□□ 0.03
HDAC7-228ENST00000548938 HNRNPH3P31942 346 aaKnown RBP15.23■□□□□ 0.03
HDAC7-228ENST00000548938 ALS2CLQ60I27 953 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 ALS2CR12Q96Q35 445 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 ZNF652Q9Y2D9 606 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 ZNF831Q5JPB2 1677 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 M0R2N6 131 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 ORC4O43929 436 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 AKR1B10O60218 316 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 CCDC152Q4G0S7 254 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 CLEC4GQ6UXB4 293 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 MS4A14Q96JA4 679 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 NCAPGQ9BPX3 1015 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 SIK3Q9Y2K2 1263 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 ZSCAN5CA6NGD5 496 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-228ENST00000548938 SLC4A8Q2Y0W8 1093 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 DHX37Q8IY37 1157 aaKnown RBP15.23■□□□□ 0.03
HDAC7-228ENST00000548938 STAG2Q8N3U4 1231 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 TLR10Q9BXR5 811 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 PCDHA6Q9UN73 950 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 PCDHA8Q9Y5H6 950 aa15.23■□□□□ 0.03
HDAC7-228ENST00000548938 ESYT3A0FGR9 886 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 NNTQ13423 1086 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 SWT1Q5T5J6 900 aaKnown RBP15.22■□□□□ 0.03
HDAC7-228ENST00000548938 CABP7Q86V35 215 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 SEPT12Q8IYM1 358 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 KIAA0895Q8NCT3 520 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 MTMR8Q96EF0 704 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 SEMA6BQ9H3T3 888 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
HDAC7-228ENST00000548938 TSPY2A6NKD2 308 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 LRRC53A6NM62 1247 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 ZEB2O60315 1214 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 GLI1P08151 1106 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 FAM153BP0C7A2 387 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 PAFAH1B1P43034 410 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 ATP2B2Q01814 1243 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 TXNRD1Q16881 649 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 FAM153CQ494X1 144 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 CCDC43Q96MW1 224 aaKnown RBP15.22■□□□□ 0.03
HDAC7-228ENST00000548938 CEP89Q96ST8 783 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 FAM153AQ9UHL3 310 aa15.22■□□□□ 0.03
HDAC7-228ENST00000548938 A0A1B0GUL6 1792 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 BTAF1O14981 1849 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 BUB1O43683 1085 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 LCA5LO95447 670 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 ERCC3P19447 782 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 KIF5BP33176 963 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 MAGEA1P43355 309 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 CARSP49589 748 aaKnown RBP15.21■□□□□ 0.03
HDAC7-228ENST00000548938 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
HDAC7-228ENST00000548938 RRAGAQ7L523 313 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 CCDC47Q96A33 483 aaKnown RBP15.21■□□□□ 0.03
HDAC7-228ENST00000548938 RNPC3Q96LT9 517 aaKnown RBP15.21■□□□□ 0.03
HDAC7-228ENST00000548938 MMRN2Q9H8L6 949 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 CCNL1Q9UK58 526 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-228ENST00000548938 NFU1Q9UMS0 254 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 CAPN7Q9Y6W3 813 aa15.21■□□□□ 0.03
HDAC7-228ENST00000548938 ZNF233A6NK53 670 aa15.21■□□□□ 0.02
HDAC7-228ENST00000548938 MNAT1P51948 309 aa15.21■□□□□ 0.02
HDAC7-228ENST00000548938 APBA1Q02410 837 aa15.21■□□□□ 0.02
HDAC7-228ENST00000548938 SEMA3FQ13275 785 aa15.21■□□□□ 0.02
HDAC7-228ENST00000548938 VWA3BQ502W6 1294 aa15.21■□□□□ 0.02
HDAC7-228ENST00000548938 CNPY4Q8N129 248 aa15.21■□□□□ 0.02
HDAC7-228ENST00000548938 NDST4Q9H3R1 872 aa15.21■□□□□ 0.02
HDAC7-228ENST00000548938 DCP1AQ9NPI6 582 aaPredicted RBP15.21■□□□□ 0.02
HDAC7-228ENST00000548938 RPS6KA4O75676 772 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 SLC1A4P43007 532 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 DNA2P51530 1060 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 GUCY1A3Q02108 690 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 GFPT1Q06210 699 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-228ENST00000548938 SLC35G1Q2M3R5 365 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 TMC4Q7Z404 712 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 MYCBPQ99417 103 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-228ENST00000548938 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 SH3GLB2Q9NR46 395 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 NHSQ6T4R5 1651 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 LOC102724159A0A0B4J2E5 919 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms